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Spatial ecological data analysis with R
 
 
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Summary Lists SCM R Packages
 
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Contributed R Packages

Below is a list of all packages provided by project Spatial ecological data analysis with R.

Important note for package binaries: R-Forge provides these binaries only for the most recent version of R, but not for older versions. In order to successfully install the packages provided on R-Forge, you have to switch to the most recent version of R or, alternatively, install from the package sources (.tar.gz) in older versions of R. All packages are built/checked according to this schedule.

  AEM - Tools to construct Asymmetric eigenvector maps (AEM) spatial variables  
 

Tools to construct Asymmetric eigenvector maps (AEM) spatial variables


Download:   Package source (.tar.gz) | Windows binary (.zip) | MacOS X leopard binary (.tgz)

To install this package directly within R type: install.packages("AEM", repos="http://R-Forge.R-project.org")

Version: 0.2-6 | Last change: 2010-01-29 23:07:14+01 | Rev.: 77

 
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  hubbell - Functions for Hubbell's Grand Unified Theory  
 

An educational package to accompany Hubbell's "Unified Neutral Theory" book. Mainly used for illustrating lectures, but some functions have spatial connotations.


Download:   Package source (.tar.gz) | Windows binary (.zip) | MacOS X leopard binary (.tgz)

To install this package directly within R type: install.packages("hubbell", repos="http://R-Forge.R-project.org")

Version: 1.6-1 | Last change: 2009-02-17 11:46:07+01 | Rev.: 58

 
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  mefaspat - Functions for Spatial Ecological Data and Compatibility with the mefa Package  
 

Miscellaneous functions for mainly multivariate spatial ecological data and compatibility with the mefa package.


Download:   Package source (.tar.gz) | Windows binary (.zip) | MacOS X leopard binary (.tgz)

To install this package directly within R type: install.packages("mefaspat", repos="http://R-Forge.R-project.org")

Version: 1.0-2 | Last change: 2009-05-25 09:08:19+02 | Rev.: 73

 
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  metapop - Metapopulations and Incidence Functions  
 

Hanski's metapopulation model and fitting incidence functions. The main content of the package is a pdf document about fitting incidence functions models in base R, but there are a couple of associated functions.


Download:   Package source (.tar.gz) | Windows binary (.zip) | MacOS X leopard binary (.tgz)

To install this package directly within R type: install.packages("metapop", repos="http://R-Forge.R-project.org")

Version: 1.0 | Last change: 2008-06-11 17:12:08+02 | Rev.: 27

 
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  packfor - Forward Selection with permutation (Canoco p.46)  
 

Forward Selection as in CANOCO based on permutation procedure using residuals from the reduced model. Y can be univariate (multiple regression) or multivariate (redundancy analysis).


Download:   Package source (.tar.gz) | Windows binary (.zip) | MacOS X leopard binary (.tgz)

To install this package directly within R type: install.packages("packfor", repos="http://R-Forge.R-project.org")

Version: 0.0-7 | Last change: 2009-02-17 11:46:07+01 | Rev.: 58

 
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  PCNM - PCNM spatial eigenfunction and principal coordinate analyses  
 

Spatial eigenfunction analysis by principal coordinates of neighbour matrices (PCNM) and principal coordinate analysis.


Download:   Package source (.tar.gz) | Windows binary (.zip) | MacOS X leopard binary (.tgz)

To install this package directly within R type: install.packages("PCNM", repos="http://R-Forge.R-project.org")

Version: 1.9 | Last change: 2009-05-27 16:11:33+02 | Rev.: 75

 
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  sedarJombart - Thibaut Jombart's contribution to SEDAR package  
 

Various spatial tools originally developped in the adegenet package.


Download:   Package source (.tar.gz) | Windows binary (.zip) | MacOS X leopard binary (.tgz)

To install this package directly within R type: install.packages("sedarJombart", repos="http://R-Forge.R-project.org")

Version: 1.0-0 | Last change: 2009-04-08 17:58:46+02 | Rev.: 72

 
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  sedarVegan - Spatial and ade4 support for vegan  
 

Working package to develop spatial functions and ade4 compatibility for vegan within sedar project.


Download:   Package source (.tar.gz) | Windows binary (.zip) | MacOS X leopard binary (.tgz)

To install this package directly within R type: install.packages("sedarVegan", repos="http://R-Forge.R-project.org")

Version: 0.1-2 | Last change: 2008-10-14 13:15:46+02 | Rev.: 45

 
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  spacemakeR - Spatial modelling  
 

Package to compute principal coordinate analysis of neighbor matrices (PCNM) and moran's eigenvectors maps (MEM).


Download:   Package source (.tar.gz) | Windows binary (.zip) | MacOS X leopard binary (.tgz)

To install this package directly within R type: install.packages("spacemakeR", repos="http://R-Forge.R-project.org")

Version: 0.0-4 | Last change: 2010-02-02 19:20:46+01 | Rev.: 78

 
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