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61 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Linear quantile mixed models - This project is aimed at developing an R package to fit and analyse quantile regression models with random effects. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Regression Models [Filter]
- Topic : Robust Statistics [Filter]
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Registered: 2012-05-15 16:23 |
1. rPithon: use Python over a 'pipe' - rPithon is based on rPython but instead of linking to the Python libraries, a Python program is started and is communicated with using a 'pipe'. This allows different R programs/packages to use different Python instances if desired. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Python [Filter]
- Programming Language : R [Filter]
- Topic : Software Development [Filter]
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Registered: 2014-12-24 12:43 |
2. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Genetics [Filter]
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Registered: 2010-01-08 16:59 |
3. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2012-03-28 07:52 |
4. Phylobase Extension - This package provides classes and methods which help read/write/manipulate branch-annotated phylogenetic trees (SIMMAP-format) and supports for a few other extra phylogenetic tree features (like tree weight).
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- Development Status : 3 - Alpha [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
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- Operating System : POSIX [Filter]
- Programming Language : R [Filter]
- Topic : Genetics : Phylogenetics [Filter]
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Activity Percentile: 0.00
Registered: 2011-04-26 02:20 |
5. Summarizing Data with Graphs - Summarizing Data with Graphs |
- Development Status : 2 - Pre-Alpha [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
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- Operating System : POSIX [Filter]
- Programming Language : R [Filter]
- Topic : Graphical Models [Filter]
- Topic : Graphics : Plotting [Filter]
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Activity Percentile: 0.00
Registered: 2009-01-19 07:50 |
6. Harmony - This package is a natural language processing (NLP) library that allows users to access large language models and use them to compare datasets where variable names are in unstructured text form. The target users are often academic researchers in the social sciences, such as psychology/mental health. We are actively recruiting contributors. We have an existing Python library also.
The source code is at: https://github.com/harmonydata/harmony_r
The web front-end of the tool is at: https://harmonydata.ac.uk/
What does Harmony do?
* Psychologists and social scientists often have to match items in different questionnaires, such as "I often feel anxious" and "Feeling nervous, anxious or afraid".
* This is called harmonisation.
* Harmonisation is a time consuming and subjective process.
* Going through long PDFs of questionnaires and putting the questions into Excel is no fun.
* Enter Harmony, a tool that uses natural language processing and generative AI models to help researchers harmonise questionnaire items, even in different languages. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
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- License : OSI Approved [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Social Sciences [Filter]
- Topic : Text : Text Mining [Filter]
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Registered: 2025-02-13 10:40 |
7. rgl: 3D visualization support - rgl development has moved to Github.
rgl is a 3D visualization system based on OpenGL. It provides a medium to high level interface for use in R, currently modelled on classic R graphics, with extensions to allow for interaction. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Other Environment [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Graphics : Dynamic Graphics [Filter]
- Topic : Graphics : Graphics Systems [Filter]
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Registered: 2008-08-16 13:50 |
8. NeuroSpatCo - The package is used to search for patterns of organization in human prefrontal cortex of both horizontal (cell body) and vertical plane (minicolumns). |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Other Environment [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers [Filter]
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- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- License : Public Domain [Filter]
- Natural Language : English [Filter]
- Natural Language : Spanish [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Programming Language : Tcl [Filter]
- Topic : Cluster Analysis : Other Cluster Algorithms [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2011-05-10 20:54 |
9. ZooImage - ZooImage is a software (based on R and ImageJ) to analyze plankton samples, using image analysis and machine learning techniques. This is the old repository, please, look at https://github.com/SciViews/zooimage for latest version! |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Other Environment [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : Java [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Machine Learning [Filter]
- Topic : Other/Nonlisted Topic [Filter]
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Registered: 2009-02-18 14:57 |
10. greenbrown - greenbrown is a collection of functions to analyse trends, trend changes and phenology in gridded time series like from satellite observations or climate model simulations. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : MacOS (Now Filtering)
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- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics [Filter]
- Topic : Time Series [Filter]
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Registered: 2013-02-27 17:37 |
11. SynergizeR - This package provides programmatic access to The Synergizer service for translating between sets of biological identifiers. |
- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Medical Science [Filter]
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Registered: 2011-11-04 17:46 |
12. arm - R functions for processing lm, glm, mer and polr outputs. |
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : Other OS [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics [Filter]
- Topic : Graphics [Filter]
- Topic : Regression Models [Filter]
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Registered: 2008-04-09 23:40 |
13. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD. |
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : Other/Proprietary License [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Computational Physics [Filter]
- Topic : Connectivity [Filter]
- Topic : High Performance Computing : Large Memory [Filter]
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Registered: 2009-06-17 16:54 |
14. Hierarchical Generalized Linear Models - The aim of the project is to develop a series of packages, including the hglm package, which implement the estimation algorithm of different random effects models based on the hierarchical likelihood theory. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Genetics : QTL Mapping [Filter]
- Topic : Multivariate Statistics : Linear Models [Filter]
- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
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Registered: 2009-10-02 07:07 |
15. Extremal Dependence - Extremal Dependence package provides parametric and nonparametric statistical methods for modelling and estimating the dependence of extreme values |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
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Registered: 2014-12-02 11:09 |
16. SpatialExtremes - The SpatialExtremes package aims to develop tools for the modeling of spatial extremes. The knowledge of the univariate/multivariate distribution of extremes is not enough. This package will try to fill this gap. |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : French [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Multivariate Statistics : Latent Variable Approaches [Filter]
- Topic : Other/Nonlisted Topic [Filter]
- Topic : Spatial Data & Statistics [Filter]
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Registered: 2008-10-04 11:03 |
17. dnet - dnet is an open-source R package for integrative analysis of digitised data in terms of network, ontology and evolution, including: identification and visualisation of gene-active dynamic subnetworks; random walk with restart; and enrichment analysis |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
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- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Datasets [Filter]
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Registered: 2014-01-22 14:22 |
18. GeneticMediation - GeneticMediation provides methods for conducting causal mediation analysis on data from the ROSMAP study. It also provides methods for cleaning, matching, and preparing the data for analysis. |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
- Topic : Genetics : Population Genetics [Filter]
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Registered: 2020-04-25 19:28 |
19. addendum - Utility functions that should have been in R: easy glmnet, pretty graphing and swift debugging and profiling. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Other Environment [Filter]
- Intended Audience : Developers [Filter]
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- Natural Language : English [Filter]
- Operating System : MacOS (Now Filtering)
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Machine Learning : Model Selection and Validation [Filter]
- Topic : Multivariate Statistics : Missing Data [Filter]
- Topic : Regression Models [Filter]
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Registered: 2011-06-17 13:35 |
61 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>