Software Map
Project Tree
Now limiting view to projects in the following categories:
License :: OSI Approved :: GNU Lesser General Public License (LGPL) [Remove This Filter]
32 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. RMVL - Mappable vector library provides convenient way to access large datasets on solid state drives. This bypasses limitation of physical memory size as well as limited bandwidth of database interfaces. Memory mapped data can be shared between multiple R processes. Access speed depends on storage medium, so solid state drive is recommended, preferably with PCI Express (or M.2 nvme) interface. The data is memory mapped into R and then accessed using usual R list and array subscription operators. The layout of underlying MVL files is optimized for large datasets. The vectors are stored to guarantee alignment for vector intrinsics after memory map. The package is built on top of libMVL, which can be used as standalone C library. libMVL has simple C API making it easy to interchange of datasets with outside programs. |
- Development Status : 3 - Alpha [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Database [Filter]
- Topic : High Performance Computing : Large Memory [Filter]
- Topic : High Performance Computing : Parallel Computing [Filter]
|
Activity Percentile: 87.50
Registered: 2021-08-19 02:16 |
1. CellMix - Resources for performing gene expression deconvolution in R, i.e. estimating cell proportions and/or cell-specific gene expression from global gene expression measured in heterogeneous samples.
Currently hosted packages: csSAM and CellMix packages. |
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Genetics [Filter]
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2013-04-11 08:27 |
2. Spatiotemporal Data S4 class/meths - Spatiotemporal data S4 objects, methods, support for data with spatial and temporal components |
- Development Status : 1 - Planning [Filter]
- Development Status : 2 - Pre-Alpha [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Classes for Spatial Data [Filter]
|
Activity Percentile: 0.00
Registered: 2009-09-26 15:38 |
3. Word lists for psychology experiments - This package collects several classical word pools used
most often to provide lists of words in psychological
studies of learning and memory. |
- Development Status : 3 - Alpha [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Topic : Datasets [Filter]
- Topic : Social Sciences [Filter]
|
Activity Percentile: 0.00
Registered: 2012-11-27 19:49 |
4. SQL-based analysis for large surveys - Analysing large complex surveys, such as the American Community Survey, using R to generate SQL code for MonetDB. |
- Development Status : 3 - Alpha [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : PL/SQL [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Database : R Interfaces [Filter]
- Topic : Social Sciences [Filter]
|
Activity Percentile: 0.00
Registered: 2012-09-18 04:53 |
5. Rcplex - Interface to the CPLEX optimization engine. Supports Linux and Windows. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
- Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]
|
Activity Percentile: 0.00
Registered: 2008-08-04 05:27 |
6. rmodest - Rmodest is a package that will allow you to easily fit mortality functions to your survival data, and to test hypotheses about your data. |
- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : OS Independent [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2008-04-24 04:24 |
7. QuACN - This package includes methods for the analysis of complex networks. To characterize complex networks structurally we implemented topological measures for graphs. It includes information and non-information theoretic network measures. |
- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Medical Science [Filter]
|
Activity Percentile: 0.00
Registered: 2010-05-18 12:37 |
8. DNA Microarray Datasets - Bioconductor offers GEOquery and ArrayExpress for accessing DNA microarray data in GEO and ArrayExpress. It also offers microarray data packages. This project is an additional container of microarray data packages for depositors who prefer to use R-forge. |
- Development Status : 1 - Planning [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows : Windows Vista [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Datasets [Filter]
|
Activity Percentile: 0.00
Registered: 2010-02-09 15:03 |
9. speedR - speedR:An R-package for interactive GUI-based data import, filtering and complex ready-to-use code generation to speed up your productivity. speedR recognizes file formats like Excel (.xls and .xlsx), open office calc, .csv and .txt files automatically. |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : Java [Filter]
- Programming Language : R [Filter]
- Topic : Connectivity [Filter]
- Topic : Graphical User Interface [Filter]
- Topic : Software Development : Code Generators [Filter]
|
Activity Percentile: 0.00
Registered: 2010-10-29 08:48 |
10. aroma.* packages [MOVED TO GITHUB] - This repository and all of its packages have been moved to https://github.com/HenrikBengtsson/ |
- Development Status : 3 - Alpha [Filter]
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : No Input/Output (Daemon) [Filter]
- Environment : Web Environment [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- License : Other/Proprietary License [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Database [Filter]
- Topic : Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2009-05-19 20:01 |
11. Belief Propagation - This project seeks to implement generic belief propagation in order to do efficient on graphical models. It will also allow for optimizations using parallel computing and efficient memory management. |
- Development Status : 2 - Pre-Alpha [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Graphical Models [Filter]
|
Activity Percentile: 0.00
Registered: 2010-06-25 13:25 |
12. stdt - Screening techniques |
- Development Status : 1 - Planning [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
|
Activity Percentile: 0.00
Registered: 2008-03-01 02:02 |
13. Multiprecision Complex Number Arithmetic - An interface to the mpc library for the arithmetic of complex numbers with arbitrarily high precision and correct rounding of the result. |
- Development Status : 3 - Alpha [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : POSIX [Filter]
- Programming Language : R [Filter]
- Topic : Numerical Analysis : Numerical Methods in Complex Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2011-03-30 06:37 |
14. mvabund: multivariate analysis 4 ecology - A set of tools for displaying, modeling and analysing multivariate abundance data in community ecology. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Programming Language : R [Filter]
- Topic : Environmetrics [Filter]
- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
|
Activity Percentile: 0.00
Registered: 2012-05-18 05:57 |
15. diagnosis - An R package for evaluation of the accuracy of diagnostic tests or biomarkers for classification (screening or diagnosis) and prediction (risk or prognosis). |
- Development Status : 1 - Planning [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2009-03-08 23:28 |
16. SMfSB - R code associated with the second and third editions of the book Stochastic Modelling for Systems Biology, by Darren J Wilkinson, published by Chapman & Hall/CRC Press. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Bioinformatics : Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-02-18 14:08 |
17. lpSolveAPI - An R interface for lp_solve, a Mixed Integer Linear Programming (MILP) solver with support for pure linear, (mixed) integer/binary, semi-continuous and special ordered sets (SOS) models. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2008-02-08 10:47 |
18. SBML Model Package - A collection of SBML Models with some experimental and simulated datasets. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
|
Activity Percentile: 0.00
Registered: 2009-12-15 12:39 |
19. basisR - This package provides access to the web-services exposed by the BASIS system. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Mathematics [Filter]
- Topic : High Performance Computing : Grid Computing [Filter]
|
Activity Percentile: 0.00
Registered: 2009-12-15 12:37 |
32 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>