Software Map
Project Tree
Now limiting view to projects in the following categories:
Programming Language :: R [Remove This Filter]
316 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. HTSAnalysis - This project contains R packages for the statistical analysis of high throughput sequencing data.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : Artistic License [Filter]
- Natural Language : English [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2012-10-16 20:41 |
1. Patchwork - Allele-specific Copy-number analysis for whole-genome sequenced data in CompleteGenomics or BAM format.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- Natural Language : English [Filter]
- Programming Language : Perl [Filter]
- Programming Language : Python [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Visualization [Filter]
|
Activity Percentile: 0.00
Registered: 2011-10-31 13:53 |
2. Educational Assessment Tools - The package eat is designed to simplify data preparation and IRT modeling with the software ConQuest within the R programming environment. It includes routines for automation of data preprocessing and an interface to specify and run several IRT models.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows : Windows NT/2000/XP [Filter]
- Operating System : Microsoft : Windows : Windows Vista [Filter]
- Programming Language : R (Now Filtering)
- Topic : Multivariate Statistics : Latent Variable Approaches [Filter]
|
Activity Percentile: 0.00
Registered: 2012-01-18 16:07 |
3. chemosensors - This package introduces a software tool that allows for the design of synthetic experiments in machine olfaction.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Chemoinformatics [Filter]
- Topic : Machine Learning [Filter]
|
Activity Percentile: 0.00
Registered: 2012-01-19 14:28 |
4. Meta-Analysis of Diagnostic Accuracy - The mada package (Meta-Analysis of Diagnostic Accuracy) provides model fitting functions for diagnostic accuracy data. This includes the bivariate model of Reitsma et al. (2005) which is equivalent to the HSROC by Rutter&Gatsonis (2001).
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Social Sciences [Filter]
|
Activity Percentile: 0.00
Registered: 2012-01-25 11:07 |
5. Probabilistic Suffix Trees - The PST library allows to fit and visualize Probabilistic Suffix Trees (PST), the construction that stores Variable Length Markov Chains (VLMC). Fitted PSTs can be used to predict, generate or impute categorical sequences.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Graphics [Filter]
- Topic : Machine Learning [Filter]
- Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
|
Activity Percentile: 0.00
Registered: 2012-01-04 10:50 |
6. Open Perimeter Interface (OPI) - The OPI is a standard for interfacing with visual field testing machines (perimeters). There are implementations for the Octopus 900, Heidelberg Edge Perimeter, and simulators for white-on-white perimetry.
|
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Connectivity [Filter]
|
Activity Percentile: 0.00
Registered: 2011-10-14 00:28 |
7. synbreed - Collection of statistical and genetic methods developed for the synbreed project for synergistic plant and animal breeding.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-03-05 10:51 |
8. Top-kriging for R - The rtop package has methods for geostatistical interpolation of data with irregular support, such as runoff related data or health data. The package also has methods for fitting of point variograms for such data.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R (Now Filtering)
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-11-04 15:05 |
9. MEET.5.1:Motif Element Estimation Tools - MEET 5.1 is an R-package that includes a set of models, aprox. 550, and tools for the detection of cis-regulatory sequences.
|
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : Spanish [Filter]
- Operating System : Microsoft : Windows : Windows NT/2000/XP [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Mathematics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-08-10 14:27 |
10. PC-Axis with R - The file format of the PC-Axis family of software is used by international and national institutions to publish statistical data. This project provides a set of functions for reading and writting PC-Axis files with R.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Programming Language : R (Now Filtering)
- Topic : Datasets [Filter]
|
Activity Percentile: 0.00
Registered: 2011-06-02 21:01 |
11. plantbreeding - plantbreeding: R Software package for analysis and visualization of data from plant breeding and genetics experiments.
|
- Development Status : 4 - Beta [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
- Topic : Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2012-07-01 21:32 |
12. Distance Weighted Discrimination (DWD) - Distance Weighted Discrimination (DWD) is a machine learning tool similar to SVM but with better breakdown properties as the number of variables increases in relationship to the number of observations.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Machine Learning : Support Vector Machines [Filter]
|
Activity Percentile: 0.00
Registered: 2011-10-21 13:31 |
13. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2012-07-03 03:50 |
14. Benchmarking genomic data integration - Comparison pipeline for multi-platform data integration algorithms for functional genomics studies. Provides tools to compare performance between publicly available implementations
|
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : BSD License [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Genetics [Filter]
- Topic : Multivariate Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-02-02 00:51 |
15. Cytangle - Analyze single cell mass cytometry data
|
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : Artistic License [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Cluster Analysis [Filter]
- Topic : Multivariate Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2016-10-26 12:51 |
16. R2STATS: A GUI for GLM(M) - R2STATS is a gWidgetsRGtk2 GUI for fitting GLM and GLMM in R. It is intended to make model comparisons easy, for an arbitrary number of models. It also provide automatic plots for all models.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Education : GUI [Filter]
- Topic : Graphical User Interface [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
|
Activity Percentile: 0.00
Registered: 2011-07-01 18:40 |
17. splm: spatial panel data models - A comprehensive toolset for ML and GM estimation and diagnostic testing of econometric models for spatial panel data.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Econometrics [Filter]
- Topic : Spatial Data & Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2009-02-06 17:34 |
18. AtelieR - The AtelieR package is a collection of simulation and computation programs for statistical inference and bayesian model comparisons, with a GTK GUI. Specialized functions for automatic search of the best model by Bayes factors are provided.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bayesian Statistics : R Interfaces [Filter]
- Topic : Education : GUI [Filter]
|
Activity Percentile: 0.00
Registered: 2011-07-06 19:01 |
19. Roxygen - Roxygen is a Doxygen-like documentation system for R; allowing in-source specification of Rd files, collation and namespace directives. Roclets (modular drivers) provide an extensibility layer.
|
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Software Development [Filter]
- Topic : Text : Documentation [Filter]
|
Activity Percentile: 0.00
Registered: 2008-04-22 13:05 |
316 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
