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54 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. synbreed - Collection of statistical and genetic methods developed for the synbreed project for synergistic plant and animal breeding.

Development Status : 4 - Beta [Filter]
Intended Audience : Developers [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Natural Language : German [Filter]
Operating System : Microsoft : Windows [Filter]
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Programming Language : R [Filter]
Topic : Bioinformatics : Statistics [Filter]
Topic : Bioinformatics : Visualization [Filter]
Topic : Genetics [Filter]

Activity Percentile: 0.00

Registered: 2010-03-05 10:51

1. Customized Gene Set Enrichment Analysis - Customized Gene Set Enrichment Analysis, including GO/KEGG.
Development Status : 3 - Alpha [Filter] Environment : Win32 (MS Windows) [Filter] License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter] Natural Language : English (Now Filtering) Operating System : Microsoft : Windows : Windows NT/2000/XP [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics [Filter]	Activity Percentile: 0.00 Registered: 2009-07-07 03:54

2. Data Analysis Using Regression - R functions for processing lm, glm, and polr outputs. This is a lite version of arm that does not deal with mer class.

Development Status : 1 - Planning [Filter]
Development Status : 5 - Production/Stable [Filter]
Intended Audience : Developers [Filter]
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Intended Audience : System Administrators [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English (Now Filtering)
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Programming Language : R [Filter]
Topic : Bayesian Statistics : General Model Fitting [Filter]
Topic : Bioinformatics : Statistics [Filter]
Topic : Bioinformatics : Visualization [Filter]

Activity Percentile: 0.00

Registered: 2008-07-24 04:32

3. Tools for analysis of epigenomic data - Useful functions for quality assessment, visualization, summarization and statistical analysis of epigenomics experiments.
Development Status : 4 - Beta [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter] Natural Language : English (Now Filtering) Operating System : OS Independent [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics [Filter] Topic : Bioinformatics : Visualization [Filter]	Activity Percentile: 0.00 Registered: 2010-03-10 09:59

4. HTSAnalysis - This project contains R packages for the statistical analysis of high throughput sequencing data.
Development Status : 4 - Beta [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : Artistic License [Filter] Natural Language : English (Now Filtering) Programming Language : R [Filter] Topic : Bioinformatics : Statistics [Filter] Topic : Biostatistics & Medical Statistics [Filter]	Activity Percentile: 0.00 Registered: 2012-10-16 20:41

5. cRacker - cRacker automates standard normalization strategies of quantitative proteomic experiments. It simplifies the analysis of quantified peptide lists coming from various proteomic quantitation softwares.

Development Status : 4 - Beta [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Registered: 2012-07-12 22:01

6. GADA - GADA is an R package for fast and accurate method for detecting copy number alterations (CNA) from array data. http://groups.google.com/group/gadaproject
Development Status : 4 - Beta [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English (Now Filtering) Operating System : OS Independent [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics [Filter]	Activity Percentile: 0.00 Registered: 2010-10-09 02:03

7. waveTiling - Perform transcriptome analysis from tiling array data by a wavelet-based functional model.
Development Status : 3 - Alpha [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English (Now Filtering) Operating System : OS Independent [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics [Filter]	Activity Percentile: 0.00 Registered: 2011-12-05 20:42

8. cvrcalc - A Cardiovascular Risk's Calculator by Scores

Development Status : 5 - Production/Stable [Filter]
Environment : Win32 (MS Windows) [Filter]
Environment : X11 Applications [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Topic : Bioinformatics : Medical Science [Filter]
Topic : Bioinformatics : Statistics [Filter]
Topic : Biostatistics & Medical Statistics [Filter]

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Registered: 2013-08-02 12:18

9. NewmanOmics - Develop and implement extensions to the Newman studentized range statistic that can be applied to transcriptomic data
Development Status : 4 - Beta [Filter] Environment : Other Environment [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved [Filter] Natural Language : English (Now Filtering) Operating System : OS Independent [Filter] Programming Language : Python [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics [Filter]	Activity Percentile: 0.00 Registered: 2017-02-15 20:58

10. Peirce - Illustrate Peirces criterion for rejection of outliers from a normal distribution.

Development Status : 4 - Beta [Filter]
Environment : Other Environment [Filter]
Intended Audience : Developers [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
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Topic : Bioinformatics : Statistics [Filter]

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Registered: 2012-09-07 07:56

11. modEvA - modEvA is an R package for species distribution model evaluation and analysis.
Development Status : 4 - Beta [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English (Now Filtering) Operating System : OS Independent [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics [Filter] Topic : Spatial Data & Statistics : Ecological Analysis [Filter]	Activity Percentile: 0.00 Registered: 2014-04-04 11:51

12. pi0 estimators - Estimation of the proportion of true null hypotheses (pi0) from a large number of hypothesis tests; Non/parametric recovery of noncentrality parameter distribution; False discovary rates (FDR) computation.

Development Status : 3 - Alpha [Filter]
Environment : Console (Text Based) [Filter]
Environment : X11 Applications [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Operating System : OS Independent [Filter]
Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Statistics [Filter]
Topic : Genetics : Multiple Testing [Filter]
Topic : Multivariate Statistics [Filter]

Activity Percentile: 0.00

Registered: 2010-03-21 02:01

13. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties.

Development Status : 4 - Beta [Filter]
Environment : Console (Text Based) [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English (Now Filtering)
Operating System : OS Independent [Filter]
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Programming Language : R [Filter]
Topic : Bayesian Statistics [Filter]
Topic : Bioinformatics : Statistics [Filter]
Topic : Genetics [Filter]

Activity Percentile: 0.00

Registered: 2011-10-11 08:51

14. qPCR - qPCR is a method for detecting and quantifying mRNA from a given sample. This project attempts to solve 3 main problems in analysis of qPCR data Unification of different output formats Quality Control to find problematic reactions Normalisation of data
Development Status : 2 - Pre-Alpha [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English (Now Filtering) Programming Language : R [Filter] Topic : Bioinformatics : Statistics [Filter] Topic : Bioinformatics : Visualization [Filter]	Activity Percentile: 0.00 Registered: 2008-10-09 17:22

15. Layered and chained mixture models - Layered and chained mixture models for various univariate and multivariate distributions.

Development Status : 3 - Alpha [Filter]
Environment : Console (Text Based) [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English (Now Filtering)
Programming Language : R [Filter]
Topic : Bioinformatics : Statistics [Filter]
Topic : Multivariate Statistics : Multivariate Distributions [Filter]
Topic : Multivariate Statistics : Unsupervised Classification [Filter]

Activity Percentile: 0.00

Registered: 2011-05-10 07:45

16. Low Rank Gaussian Process Regression - Fit a Low Rank Gaussian Process Regression / Linear Mixed Model for large datasets. These models are widely used in statistical genetics as a test of association while correcting for the confounding effects of kinship and population structure.
Environment : Console (Text Based) [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English (Now Filtering) Operating System : MacOS [Filter] Operating System : POSIX : Linux [Filter] Programming Language : C/C\+\+ [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics [Filter] Topic : Genetics [Filter]	Activity Percentile: 0.00 Registered: 2013-12-19 15:12

17. GenABEL - A suite of packages for statistical genomics
Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English (Now Filtering) Programming Language : C/C\+\+ [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics [Filter] Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]	Registered: 2009-08-12 17:07

18. smoothtest - This package implements a whole series of smooth tests that serve as goodness of fit tests for univariate data against a whole range of distributions. The tests can be performed both parametric and data driven.

Development Status : 4 - Beta [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English (Now Filtering)
Operating System : OS Independent [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Statistics [Filter]
Topic : Numerical Analysis : Prob\. Methods, Simulation and Stochastic Differential Equations [Filter]
Topic : Other/Nonlisted Topic [Filter]

Activity Percentile: 0.00

Registered: 2011-11-29 13:02

19. therese - The purpose of this package is to propose a method for inferring networks from expression data obtained in various experimental condition. The "cLasso" (consensus Lasso) method is implemented.
Development Status : 3 - Alpha [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English (Now Filtering) Operating System : OS Independent [Filter] Programming Language : R [Filter] Topic : Bioinformatics : Statistics [Filter] Topic : Regression Models [Filter]	Activity Percentile: 0.00 Registered: 2013-07-05 08:44

54 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>