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102 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. libamtrack - This package is the R interface to the open-source, ANSI C library libamtrack (http://libamtrack.dkfz.org). It provides computational routines for research in proton and ion beam therapy.
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- Development Status : 4 - Beta [Filter]
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- Topic : Computational Physics [Filter]
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Registered: 2014-06-28 12:14 |
1. TIMP - TIMP is an R package for fitting superposition models that implements the partitioned variable projection algorithm. The package has been extensively applied to modeling spectroscopy and Fluorescence Lifetime Imaging Microscopy (FLIM) datasets.
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- Development Status : 3 - Alpha [Filter]
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- Topic : Computational Physics [Filter]
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Registered: 2007-04-30 21:06 |
2. gsDesign: Group Sequential Design - Generates group sequential designs using alpha- and beta-spending functions or Wang-Tsiatis (e.g., O'Brien-Fleming and Pocock) boundary families. Many plotting capabilities as well as non-binding futility rules are available. Easily extended.
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- Development Status : 4 - Beta [Filter]
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- Topic : Biostatistics & Medical Statistics [Filter]
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Registered: 2008-08-31 13:07 |
3. Functional diversity - The "Functional diversity" project is based on the FD package, which can compute different multidimensional FD indices. It also contains other useful tools for functional ecology, e.g. trait-based community assembly via maximum entropy models.
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- Development Status : 5 - Production/Stable [Filter]
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- Topic : Multivariate Statistics : Matrix Manipulations [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2009-06-30 15:23 |
4. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp
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- Natural Language : German [Filter]
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- Topic : Bioinformatics [Filter]
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- Topic : High Performance Computing [Filter]
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Registered: 2013-05-29 18:34 |
5. Rcplex - Interface to the CPLEX optimization engine. Supports Linux and Windows.
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- Development Status : 4 - Beta [Filter]
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- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
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- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
- Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]
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Registered: 2008-08-04 05:27 |
6. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties.
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- Topic : Bayesian Statistics [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics [Filter]
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Registered: 2011-10-11 08:51 |
7. Test for point containment in polyhedron - This project provides a function to test whether a point is contained within a closed three-dimensional polyhedron, defined by a triangular mesh. A two-dimensional version for polygons is also provided.
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- Development Status : 4 - Beta [Filter]
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- Topic : Chemoinformatics [Filter]
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Registered: 2010-04-25 17:27 |
8. diseasemapping - Geostatistics with the geostatsp package, disease mapping for areal data with diseasemapping, and basic mapping utilities with mapmisc.
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- Development Status : 5 - Production/Stable [Filter]
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- Topic : Bayesian Statistics : R Interfaces [Filter]
- Topic : Spatial Data & Statistics : Disease Mapping and Areal Data Analysis [Filter]
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
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Registered: 2008-12-02 16:49 |
9. Bayesian Estimation and Model Checking - This package mainly deals with generalized linear spatial models in Bayesian way for estimation, prediction and model checking.
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- Environment : X11 Applications : Gnome [Filter]
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- Topic : Bayesian Statistics [Filter]
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- Topic : Spatial Data & Statistics : Geostatistics [Filter]
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Registered: 2011-08-18 03:20 |
10. doSMP - The doSMP package provides a parallel backend to the foreach package's %dopar% operator, allowing parallel operation on a symmetric multiprocessor workstation.
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Registered: 2010-11-19 22:27 |
11. Local Depth - The package "localdepth" contains functions for the evaluation of some Depth functions and their corresponding local versions, namely Local Depths. Simplicial, Ellipsoid and Mahalanobis Depths are implemented for general dimension.
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- Development Status : 2 - Pre-Alpha [Filter]
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- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Multivariate Statistics [Filter]
- Topic : Robust Statistics [Filter]
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Registered: 2008-09-16 15:34 |
12. cusp - Package for applying Cobb's maximum likelihood method to fitting cusp catastrophe models to data. The package was published in the Journal of Statistical Software [see www.jstatsoft.org/v32/i08/paper].
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- Development Status : 5 - Production/Stable [Filter]
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- Topic : Econometrics : Structural Change [Filter]
- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
- Topic : Regression Models [Filter]
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Registered: 2014-10-29 16:43 |
13. Genome-wide analysis using MOSS - Performs genome-wide analysis of dense SNP array data using the mode oriented stochastic search (MOSS) algorithm in a case-control design. Includes preprocessing of the data from Plink format to the format required by the MOSS algorithm.
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- Development Status : 3 - Alpha [Filter]
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- Topic : Bayesian Statistics [Filter]
- Topic : Genetics [Filter]
- Topic : Graphical Models [Filter]
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Registered: 2011-01-07 17:53 |
14. FLR - A framework for fisheries modelling and management strategy simulation in R. Models can used to generate accurate simulations of fishery systems: stocks, fleets, assessment and management processes. http://flr-project.org
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- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Time Series [Filter]
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Registered: 2008-12-10 14:47 |
15. Hyper-g Priors for GAM selection - This R-package implements objective Bayesian model selection with penalised splines, using a so-called hyper-g prior for the parameters in the generalised additive model.
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- Development Status : 4 - Beta [Filter]
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- Topic : Bayesian Statistics : General Model Fitting [Filter]
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Registered: 2011-08-11 09:12 |
16. Estimation and Model Checking for GLSM - This package mainly deals with generalized linear spatial models for estimation, model checking and prediction by using MCMC algorithms.
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- Environment : X11 Applications [Filter]
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
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Registered: 2011-08-17 10:52 |
17. Entropy-based LISA - Provides the functions to quantify local spatial association using a novel entropy-based method, named Entropy-based Local Indicator of Spatial Association (ELSA).
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- Development Status : 3 - Alpha [Filter]
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Registered: 2013-09-23 01:30 |
18. fingerprint - Read and handle molecular fingerprint data generated by various cheminformatics tools. The package reads in a variety of formats and implements multiple similarity and dissimilarity metrics.
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Registered: 2008-10-21 19:34 |
19. Polyphase - This method accepts the genotype data, the relative physical position of the markers for species of any ploidy and returns the phased output.
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
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Registered: 2016-02-18 15:57 |
102 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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