Software Map
Project Tree
Now limiting view to projects in the following categories:
Development Status :: 5 - Production/Stable [Remove This Filter]
Intended Audience :: Developers [Remove This Filter]
136 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. Modelling Peaks Over Threshold - The project consists in developing functions for peaks over threshold modeling. Most of results come from the extreme value theory (EVT). The EVT is currently extensively used, mostly in environmental sciences and finance. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : French [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Finance : Risk Management : Value at Risk [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 50.00
Registered: 2007-09-21 14:29 |
1. Sublogo dendrograms - Sublogo dendrograms are statistical graphics that reveal correlation in biological sequence alignments. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Environment : Web Environment [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : PHP [Filter]
- Programming Language : R [Filter]
- Programming Language : Unix Shell [Filter]
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Genetics [Filter]
- Topic : Graphics : Plotting [Filter]
|
Registered: 2009-06-19 09:14 |
2. MeDiChI - R package implementing model based deconvolution of ChIP-chip (transcription factor binding) data, as published in Bioinformatics journal.
Please visit http://baliga.systemsbiology.net/medichi for source code, instructions, and R package downloads. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Machine Learning : Regularized and Shrinkage Methods [Filter]
|
Registered: 2010-05-14 17:13 |
3. scriptests - Support for using .Rt (transcript) tests
in the tests directory of a package. Provides more
convenience and features than the standard .R/.Rout.save
tests. Tests can be run under R CMD check and also
interactively. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2010-06-19 14:48 |
4. Rcpp - Seamless R and C++ Integration - The Rcpp package provides a C++ library which facilitates the integration of R and C++. R data types (SEXP) are matched to C++ objects in a class hierarchy. All R types are supported and each type is mapped to a dedicated class. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2008-03-01 16:33 |
5. Wave (music, speech, ...) analyses in R - tuneR is a collection of tools for wave analyses such as the analysis of music, handling (huge) wave files, transcription of music, speech analysis, ... |
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : R [Filter]
- Topic : Time Series [Filter]
|
Registered: 2007-06-11 10:08 |
6. R interface to GDAL, OGR and PROJ.4 - Provides bindings to Frank Warmerdam's Geospatial Data Abstraction Library (GDAL) (>= 1.11.4) and access to projection/transformation operations from the PROJ.4 library. (Migrated from Sourceforge repository) |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Other Environment [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]
|
Activity Percentile: 0.00
Registered: 2010-09-12 11:09 |
7. zoo: Time Series Infrastructure - Hosting of the project has moved to https://codeberg.org/zeileis/zoo |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Econometrics : Basic Time Series Infrastructure [Filter]
- Topic : Finance : Time Series [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2007-01-31 15:02 |
8. mzmatch.R - This package provides integration between the mzMatch/PeakML Java library (and its file formats) and the XCMS library for R. mzMatch is a modular, open source and platform independent data processing pipeline for metabolomics LC/MS data. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : Russian [Filter]
- Operating System : Microsoft : Windows : Windows Vista [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : Java [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
|
Activity Percentile: 0.00
Registered: 2010-10-20 17:09 |
9. ctv: CRAN Task Views - Hosting of the project has moved to https://codeberg.org/zeileis/ctv |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2007-06-08 16:40 |
10. doSNOW - The doSNOW package provides a parallel backend to the foreach package's %dopar% operator that provides parallel computation via R's snow package. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : High Performance Computing : Parallel Computing [Filter]
|
Activity Percentile: 0.00
Registered: 2010-11-19 22:28 |
11. Tools for handling spatial objects - Set of tools for manipulating geographic data. The package also provides interface wrappers for packages such as PBSmapping, spatstat, maps, RArcInfo, Stata tmap, WinBUGS, Mondrian, and others. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Other Environment [Filter]
- Intended Audience : Developers (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]
|
Activity Percentile: 0.00
Registered: 2010-11-16 13:09 |
12. colorspace: Computing with Colorspaces - Hosting of the project has moved to https://codeberg.org/zeileis/colorspace |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Graphics : Colors [Filter]
|
Activity Percentile: 0.00
Registered: 2007-02-15 19:23 |
13. track: store obects on disk - Automatically stores objects in files on disk so that
files are rewritten when objects are changed, and so
that objects are accessible but do not occupy memory until
they are accessed. Also tracks times when objects are created
and modified. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Database [Filter]
- Topic : High Performance Computing : Large Memory [Filter]
|
Activity Percentile: 0.00
Registered: 2010-06-22 04:40 |
14. foreach - The foreach package provides support for the foreach looping construct. Foreach is an idiom that allows for iterating over elements in a collection, without the use of an explicit loop counter. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Other Environment [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : Other/Proprietary License [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : High Performance Computing : Parallel Computing [Filter]
|
Activity Percentile: 0.00
Registered: 2010-11-18 22:18 |
15. Convert inline comments to documentation - Generates Rd files from comments in your R code, facilitating sustainable, accurate documentation and rapid package publication. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Software Development : Build Tools [Filter]
- Topic : Software Development : Code Generators [Filter]
- Topic : Text : Documentation [Filter]
|
Registered: 2009-07-29 12:37 |
16. dcr - Data Cloning in R - Data cloning (DC) uses Bayesian MCMC to make maximum likelihood inference of complex hierarchical models. The bundle includes basic infrastructure for DC with parallel computing support, and more specialized packages for ecology. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics [Filter]
- Topic : Optimization [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2009-08-17 16:25 |
17. Conditional multivariate extremes - Generalized Pareto distribution modelling, including penalized likelihood and Bayesian methods, and conditional multivariate extreme value modelling.
PROJECT MIGRATED TO Google Code: https://code.google.com/p/texmex/ |
- Development Status : 5 - Production/Stable (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Multivariate Statistics [Filter]
|
Registered: 2010-09-17 12:42 |
18. R package for spatial data classes - An R-package for dealing with spatial data in R; the sp package provide classes and methods for spatial data (points, lines, polygons, grids). Other r-spatial packages hosted here are classInt, splancs, spgrass6, spgwr and DCluster. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Classes for Spatial Data [Filter]
|
Activity Percentile: 0.00
Registered: 2011-02-18 20:53 |
19. miRtest - This package provides tests for an effect of miRNAs between conditions. Information on miRNA and mRNA expression and target prediction is merged to generate p-values describing how likely differences in miRNA regulation occur between two groups. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Multivariate Statistics : Multivariate Distributions [Filter]
|
Activity Percentile: 0.00
Registered: 2011-03-24 15:26 |
136 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>