SCM

R Development Page

Contributed R Packages

Below is a list of all packages provided by project Thresher.

Important note for package binaries: R-Forge provides these binaries only for the most recent version of R, but not for older versions. In order to successfully install the packages provided on R-Forge, you have to switch to the most recent version of R or, alternatively, install from the package sources (.tar.gz).

Packages

Mercator

Clustering and Visualizing Distance Matrices

  Defines the classes used to explore, cluster and visualize distance matrices, espcially those arising from binary data.
  Version: 0.7.3 | Last change: 2019-04-04 14:40:07+02 | Rev.: 119
  Download: linux(.tar.gz) | windows(.zip) | Build status: Current
  R install command: install.packages("Mercator", repos="http://R-Forge.R-project.org")
 
Logs:  
Package build: Source package (Linux x86_64) Windows binary (x86_64/i386)
Package check: Linux x86_64 (patched) | Linux x86_64 (devel) Windows (patched) | Windows (devel)


PCDimension

Finding the Number of Significant Principal Components

  Implements methods to automate the Auer-Gervini graphical Bayesian approach for determining the number of significant principal components. Automation uses clustering, change points, or simple statistical models to distinguish "long" from "short" steps in a graph showing the posterior number of components as a function of a prior parameter. See .
  Version: 1.1.9 | Last change: 2018-05-18 03:26:58+02 | Rev.: 72
  Download: linux(.tar.gz) | windows(.zip) | Build status: Current | Stable Release: Get PCDimension 1.1.9 from CRAN
  R install command: install.packages("PCDimension", repos="http://R-Forge.R-project.org")
 
Logs:  
Package build: Source package (Linux x86_64) Windows binary (x86_64/i386)
Package check: Linux x86_64 (patched) | Linux x86_64 (devel) Windows (patched) | Windows (devel)


SillyPutty

Silly Putty Clustering

  Implements a simple, novel clustering algorithm based on optimizing the silhouette width.
  Version: 0.1.2 | Last change: 2019-03-19 19:29:19+01 | Rev.: 112
  Download: linux(.tar.gz) | windows(.zip) | Build status: Current
  R install command: install.packages("SillyPutty", repos="http://R-Forge.R-project.org")
 
Logs:  
Package build: Source package (Linux x86_64) Windows binary (x86_64/i386)
Package check: Linux x86_64 (patched) | Linux x86_64 (devel) Windows (patched) | Windows (devel)


Thresher

Threshing and Reaping for Principal Components

  Defines the classes used to identify outliers (threshing) and compute the number of significant principal components and number of clusters (reaping) in a joint application of PCA and hierarchical clustering. See Wang et al., 2018, .
  Version: 1.1.0 | Last change: 2019-03-05 22:15:37+01 | Rev.: 95
  Download: linux(.tar.gz) | windows(.zip) | Build status: Current | Stable Release: Get Thresher 1.1.0 from CRAN
  R install command: install.packages("Thresher", repos="http://R-Forge.R-project.org")
 
Logs:  
Package build: Source package (Linux x86_64) Windows binary (x86_64/i386)
Package check: Linux x86_64 (patched) | Linux x86_64 (devel) Windows (patched) | Windows (devel)

 

Build status codes

0 - Current: the package is available for download. The corresponding package passed checks on the Linux and Windows platform without ERRORs.
1 - Scheduled for build: the package has been recognized by the build system and provided in the staging area.
2 - Building: the package has been sent to the build machines. It will be built and checked using the latest patched version of R. Note that it is included in a batch of several packages. Thus, this process will take some time to finish.
3 - Failed to build: the package failed to build or did not pass the checks on the Linux and/or Windows platform. It is not made available since it does not meet the policies.
4 - Conflicts: two or more packages of the same name exist. None of them will be built. Maintainers are asked to negotiate further actions.
5 - Offline: the package is not available. The build system may be offline or the package maintainer did not trigger a rebuild (done e.g., via committing to the package repository).

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