| Detailed description |
I'm having some problems in run the ensembling algorithm when I launch the "BIOMOD_EnsembleModeling" function from the 'biomod2' (version 3.3-7.1) package in R (version 4.0.0). The strange thing is that I was able to run this function until weeks ago. I tried with different dataset, the result was always the same, a failure. Could someone help me with this problem?!
### I trying run ensembling algorithm from each best run for each model separately and the code I use is in below ###
RF1<-BIOMOD_EnsembleModeling(Models,
chosen.models = 'models_PA12_RUN2_RF',
em.by = 'PA_dataset+repet',
eval.metric = 'all',
eval.metric.quality.threshold = c(0.7,0.7),
models.eval.meth = c('ROC', 'TSS'),
prob.mean = TRUE,
prob.cv = FALSE,
prob.ci = FALSE,
prob.ci.alpha = 0.05,
prob.median = FALSE,
committee.averaging = FALSE,
prob.mean.weight = FALSE,
prob.mean.weight.decay = 'proportional',
VarImport = 0)
### The error message following: ###
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-= Build Ensemble Models -=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
> Evaluation & Weighting methods summary :
ROC over 0.7
TSS over 0.7
> mergedAlgo_RUN1_PA1 ensemble modelingError in .local(obj, ...) : Unknown subinfo tag
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