[#6501] Error when use seqrep.grp with missing in state sequence object

Date:
2017-04-10 07:14 Priority:
3

State:
Closed

Submitted by:
Charles Mouté (charlesmoute) Assigned to:
Gilbert Ritschard (gritschard)

Resolution:
Accepted As Bug Severity:
trivial

TraMineR version:
v2.0-12

E-Mail address:
charlesmoute@gmail.com

Summary:
Error when use seqrep.grp with missing in state sequence object

Detailed description
Instead of : gr[[i]] <- seqrep(seqdata[ig, ], dist.matrix = mdis[ig,ig], dmax = dmax, ...) in the script, I think we should have seqrep(seqdata[ig, ], dist.matrix = mdis[ig,ig], dmax = max(mdis[ig,ig]), ...)" R.version _ platform x86_64-apple-darwin13.4.0 arch x86_64 os darwin13.4.0 system x86_64, darwin13.4.0 status major 3 minor 3.2 year 2016 month 10 day 31 svn rev 71607 language R version.string R version 3.3.2 (2016-10-31) nickname Sincere Pumpkin Patch

Comments:

Message
Date: 2017-07-04 09:37 Sender: Gilbert Ritschard Error occurred when diss=NULL and the default LCS distance was computed. Fixed by adding a with.missing argument to seqrep.grp that should be set as TRUE when diss=NULL and the sequences contain missing values. Available since Revision 890 (July 4, 2017).

Attachments:

Size	Name	Date	By	Download
686 KiB	Capture d’écran 2017-04-10 à 09.13.28.png	2017-04-10 07:14	charlesmoute	Capture d’écran 2017-04-10 à 09.13.28.png

Field	Old Value	Date	By
close_date	None	2017-07-04 09:37	gritschard
assigned_to	none	2017-07-04 09:37	gritschard
details	Instead of : gr[[i]] <- seqrep(seqdata[ig, ], dist.matrix = mdis[ig,ig], dmax = dmax, ...) in the script, I think we should have seqrep(seqdata[ig, ], dist.matrix = mdis[ig,ig], dmax = max(mdis[ig,ig]), ...)" R.version _ platform x86_64-apple-darwin13.4.0 arch x86_64 os darwin13.4.0 system x86_64, darwin13.4.0 status major 3 minor 3.2 year 2016 month 10 day 31 svn rev 71607 language R version.string R version 3.3.2 (2016-10-31) nickname Sincere Pumpkin Patch	2017-07-04 09:37	gritschard
status_id	Open	2017-07-04 09:37	gritschard
File Added	5151: Capture d’écran 2017-04-10 à 09.13.28.png	2017-04-10 07:14	charlesmoute