SCM

[#416] Coerce method from phylo to phylo4 is broken

Date:
2009-04-21 15:18
Priority:
3
State:
Closed
Submitted by:
François Michonneau (francois)
Assigned to:
François Michonneau (francois)
Operating System:
None
Severity:
None
Resolution:
Invalid
Component:
None
Version:
None
URL:
Summary:
Coerce method from phylo to phylo4 is broken

Detailed description


Example:
> as(tree.owls[[1]], "phylo4")
label node ancestr edge.length node.type
5 Tyto_alba 5 NA 13.5 root
6 Athene_noctua 6 5 7.3 internal
7 Asio_otus 7 6 4.2 internal
1 owls 1 7 NA tip
2 Strix_aluco 2 7 4.2 tip
3 3 6 3.1 tip
4 4 5 6.3 tip

Comments:

Message  ↓
Date: 2009-04-22 13:20
Sender: François Michonneau

Coerce method works well. The problem comes from a typo in the examples of 'read.tree' from 'ape'. I sent a message to E. Paradis.

Attached Files:

Changes

Field Old Value Date By
status_idOpen2009-04-22 15:44francois
close_date2009-04-22 15:442009-04-22 15:44francois
ResolutionNone2009-04-22 13:20francois
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