Software Map
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Topic :: Bioinformatics :: Statistics [Remove This Filter]
Development Status :: 4 - Beta [Remove This Filter]
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24 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. modEvA - modEvA is an R package for species distribution model evaluation and analysis. | |
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Activity Percentile: 8.33 Registered: 2014-04-04 11:51 |
1. synbreed - Collection of statistical and genetic methods developed for the synbreed project for synergistic plant and animal breeding.
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Activity Percentile: 0.00 Registered: 2010-03-05 10:51 |
2. smoothtest - This package implements a whole series of smooth tests that serve as goodness of fit tests for univariate data against a whole range of distributions. The tests can be performed both parametric and data driven. | |
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Activity Percentile: 0.00 Registered: 2011-11-29 13:02 |
3. calibayesR - The package also provides a web-serivce interface to the CaliBayes system. See http://www.calibayes.ncl.ac.uk for more details. | |
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Activity Percentile: 0.00 Registered: 2009-11-30 09:36 |
4. plantbreeding - plantbreeding: R Software package for analysis and visualization of data from plant breeding and genetics experiments. | |
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Activity Percentile: 0.00 Registered: 2012-07-01 21:32 |
5. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model. | |
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Activity Percentile: 0.00 Registered: 2012-07-03 03:50 |
6. cRacker - cRacker automates standard normalization strategies of quantitative proteomic experiments. It simplifies the analysis of quantified peptide lists coming from various proteomic quantitation softwares. | |
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Activity Percentile: 0.00 Registered: 2012-07-12 22:01 |
7. The forensim package - The forensim package for the R environment provides statistical tools dedicated to the interpretation of forensic DNA mixtures | |
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Activity Percentile: 0.00 Registered: 2009-04-17 15:10 |
8. Peirce - Illustrate Peirces criterion for rejection of outliers from a normal distribution. | |
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Activity Percentile: 0.00 Registered: 2012-09-07 07:56 |
9. HTSAnalysis - This project contains R packages for the statistical analysis of high throughput sequencing data. | |
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Activity Percentile: 0.00 Registered: 2012-10-16 20:41 |
10. Quasi-likelihood parameter estimation - The package provides methods for parameter estimation for statistical models that can be simulated. We follow a quasi-likelihood approach to estimate the unknown parameter by the root of the so-called quasi-score estimating function. | |
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Activity Percentile: 0.00 Registered: 2017-08-30 21:22 |
11. CENTIPEDE - CENTIPEDE is a probabilistic framework that integrates tissue-specific experimental data such as histone modifications and DNaseI cleavage patterns with genomic information such as gene annotation and evolutionary
conservation. | |
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Activity Percentile: 0.00 Registered: 2010-10-26 14:24 |
12. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486. | |
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Activity Percentile: 0.00 Registered: 2013-11-21 21:46 |
13. GADA - GADA is an R package for fast and accurate method for detecting copy number alterations (CNA) from array data.
http://groups.google.com/group/gadaproject | |
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Activity Percentile: 0.00 Registered: 2010-10-09 02:03 |
14. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor. | |
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Activity Percentile: 0.00 Registered: 2010-04-01 17:54 |
15. Evolution simulation and classification - After measuring gene frequencies of modern populations that have a common ancestor, we estimate ancestral allele frequency and selection state for each gene. A bayesian model is used and verified using the included simulator. | |
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Activity Percentile: 0.00 Registered: 2009-07-30 17:27 |
16. HaarSeg [MOVED TO GITHUB] - This repository and its package has been moved to <https://github.com/HenrikBengtsson/HaarSeg> | |
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Activity Percentile: 0.00 Registered: 2009-06-05 00:29 |
17. RMacoqui - RMacoqui develops a probability procedure for the identification of chorotypes, i.e. distribution patterns shared by a group of species, which can be operatively identified within an area (Baroni-Urbani et al., 1978). | |
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Activity Percentile: 0.00 Registered: 2015-07-04 09:37 |
18. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs. | |
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Activity Percentile: 0.00 Registered: 2009-10-07 19:54 |
19. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties. | |
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Activity Percentile: 0.00 Registered: 2011-10-11 08:51 |
24 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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