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49 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. RHRV - Package for carrying out heart rate variability studies of ECG records |
- Development Status : 6 - Mature [Filter]
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Activity Percentile: 94.44
Registered: 2010-10-14 10:22 |
1. NMF - Nonnegative Matrix Factorization - This package provides a flexible framework to perform Non-negative Matrix Factorization (NMF).
It implements a set of already published algorithms and seeding methods, and provides a framework
to test, develop and plug new/custom algorithms. |
- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Multivariate Statistics : Projection Methods : Independent Components [Filter]
- Topic : Optimization [Filter]
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Activity Percentile: 0.00
Registered: 2010-01-07 14:13 |
2. OrgMassSpecR: Organic Mass Spectrometry - Organic/biological mass spectrometry data analysis. The development version of OrgMassSpecR is on GitHub (https://github.com/OrgMassSpec) and the stable version is on CRAN (https://cran.r-project.org/). The R-Forge repository is an archive. |
- Development Status : 4 - Beta [Filter]
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Activity Percentile: 0.00
Registered: 2009-04-28 20:04 |
3. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association. |
- Development Status : 4 - Beta [Filter]
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- Programming Language : Fortran [Filter]
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Activity Percentile: 0.00
Registered: 2012-08-10 08:48 |
4. Model-Based Network Analysis - Model-based solutions for network analysis. In particular, probabilistic tools for investigating context-specific activation patterns and network topology. |
- Development Status : 1 - Planning [Filter]
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- Topic : Multivariate Statistics : Latent Variable Approaches [Filter]
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Activity Percentile: 0.00
Registered: 2010-06-14 20:56 |
5. Plant Growth Analysis - Plant Growth Analysis tools for R. It has tools to calculate Relative Growth Rate, Leaf Area Ratio, Leaf Specific Area, Leaf Weight Ratio, Unity Leaf Ratio, Root-Shoot Allometry. |
- Development Status : 3 - Alpha [Filter]
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Registered: 2011-04-04 14:59 |
6. Animal Intake Behaviour Analysis Package - POO R package for chronological Intake Behaviour Data analysis from test animals. Manage data and predict normal and irregular behaviour. |
- Development Status : 3 - Alpha [Filter]
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Activity Percentile: 0.00
Registered: 2010-08-30 08:56 |
7. RNetLogo (Discontinued) - RNetLogo is an interface to the agent-based modelling plattform NetLogo. NL can be embedded into the R environment with headless (no GUI) and interactive GUI mode. It provides functions to load models, execute commands and to get values from reporters. |
- Development Status : 5 - Production/Stable [Filter]
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- Programming Language : Java [Filter]
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Activity Percentile: 0.00
Registered: 2011-08-19 15:59 |
8. hyperSpec - hyperSpec is a R package to handle hyperspectral data, i.e. spectra plus further information such as spatial location, time, concentrations, etc.
Such data are frequently encountered in Raman, IR, NIR, UV/VIS, NMR, mass spectroscopy, AAS / AES, ... |
- Development Status : 4 - Beta [Filter]
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- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
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Activity Percentile: 0.00
Registered: 2009-02-23 09:27 |
9. RpepXML - R pepXML is an R interface to the pepXML standard for MSMS data identification. It allows pepXML files to be imported into R and for easy manipulation and filtering. |
- Development Status : 4 - Beta [Filter]
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Activity Percentile: 0.00
Registered: 2010-09-03 21:34 |
10. opm and opmdata - Analysing phenotype microarrays and growth curves: plots, curve parameters, discretization, metadata, simultaneous tests, pathways, genome annotation, feature selection, textual reports, YAML, database I/O; see also opm.dsmz.de and www.goeker.org/opm |
- Development Status : 5 - Production/Stable [Filter]
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Registered: 2013-01-17 23:06 |
11. CHNOSZ - A package for thermodynamic modeling in geochemistry and biochemistry,
with functions for equilibrium activity diagrams and chemical affinities of reactions,
supported by an extensive thermodynamic database and group additivity for proteins. |
- Development Status : 4 - Beta [Filter]
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Activity Percentile: 0.00
Registered: 2011-05-13 20:48 |
12. NameNeedle - Using Needleman-Wunsch to Match Sample Names |
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Activity Percentile: 0.00
Registered: 2014-02-03 16:21 |
13. Corbi - A collection of bioinformatics tools for general purposes such as network query, protein structure alignment, gene expression analysis. |
- Development Status : 4 - Beta [Filter]
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Activity Percentile: 0.00
Registered: 2011-09-26 05:04 |
14. lefko3: matrix projection models - Project lefko3 is intended to provided utilities to estimate and analyze population matrix projection models (MPMs). Its focus is on the development of historical MPMs, including raw and function-based, but also develops normal, "ahistorical" MPMs, age-by-stage MPMs, and integral projection models (IPMs). |
- Development Status : 6 - Mature [Filter]
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Activity Percentile: 0.00
Registered: 2021-07-15 19:48 |
15. dnet - dnet is an open-source R package for integrative analysis of digitised data in terms of network, ontology and evolution, including: identification and visualisation of gene-active dynamic subnetworks; random walk with restart; and enrichment analysis |
- Development Status : 5 - Production/Stable [Filter]
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Activity Percentile: 0.00
Registered: 2014-01-22 14:22 |
16. cMonkey - cMonkey integrated biclustering algorithm for learning co-regulated gene modules.
Please visit http://cmonkey.systemsbiology.net for source code, documentation, and R packages. |
- Development Status : 5 - Production/Stable [Filter]
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- Topic : Cluster Analysis : Other Cluster Algorithms [Filter]
- Topic : Multivariate Statistics : Supervised Classification and Discriminant Analysis [Filter]
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Registered: 2010-05-14 17:19 |
17. TopKLists - The package includes tools for inference, aggregation, and visualization of multiple ranked lists. Consolidated information from two or more such lists comprising the same set of objects can be obtained. Incomplete rankings and partial lists are allowed. |
- Development Status : 4 - Beta [Filter]
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Activity Percentile: 0.00
Registered: 2010-05-06 10:59 |
18. SeqinR: Biological Sequences in R - The seqinR package for the R environment contains utilities to retrieve and analyse biological sequences. |
- Development Status : 5 - Production/Stable [Filter]
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Activity Percentile: 0.00
Registered: 2008-07-28 09:03 |
19. Benchmarking genomic data integration - Comparison pipeline for multi-platform data integration algorithms for functional genomics studies. Provides tools to compare performance between publicly available implementations |
- Development Status : 4 - Beta [Filter]
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Activity Percentile: 0.00
Registered: 2011-02-02 00:51 |
49 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>