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48 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. SMfSB - R code associated with the second and third editions of the book Stochastic Modelling for Systems Biology, by Darren J Wilkinson, published by Chapman & Hall/CRC Press. |
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Registered: 2011-02-18 14:08 |
1. GADA - GADA is an R package for fast and accurate method for detecting copy number alterations (CNA) from array data.
http://groups.google.com/group/gadaproject |
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Registered: 2010-10-09 02:03 |
2. Range Correlations - Methods from spatial statistics are adapted and implemented to be used for assessing marginal and partial correlations in range and site data (positional data) along genomes based on the Bioconductor package GenomicRanges. |
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Registered: 2011-03-07 18:54 |
3. CENTIPEDE - CENTIPEDE is a probabilistic framework that integrates tissue-specific experimental data such as histone modifications and DNaseI cleavage patterns with genomic information such as gene annotation and evolutionary
conservation. |
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Registered: 2010-10-26 14:24 |
4. Data Analysis Using Regression - R functions for processing lm, glm, and polr outputs. This is a lite version of arm that does not deal with mer class. |
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Registered: 2008-07-24 04:32 |
5. The forensim package - The forensim package for the R environment provides statistical tools dedicated to the interpretation of forensic DNA mixtures |
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Registered: 2009-04-17 15:10 |
6. Polyphase - This method accepts the genotype data, the relative physical position of the markers for species of any ploidy and returns the phased output. |
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Registered: 2016-02-18 15:57 |
7. GenABEL - A suite of packages for statistical genomics |
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Registered: 2009-08-12 17:07 |
8. RMacoqui - RMacoqui develops a probability procedure for the identification of chorotypes, i.e. distribution patterns shared by a group of species, which can be operatively identified within an area (Baroni-Urbani et al., 1978). |
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Registered: 2015-07-04 09:37 |
9. modEvA - modEvA is an R package for species distribution model evaluation and analysis. |
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Registered: 2014-04-04 11:51 |
10. ParallABEL - ParallABEL aims to speed up the computation of GWA studies and also simplify parallelization in analysis of this important research area.
See http://www.sc.psu.ac.th/units/genome/CGBR/ParallABEL/index.html for more details. |
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Registered: 2010-04-23 07:05 |
11. Class Prediction - A suite of packages that can bu used for "class prediction" problems. Includes tools to standardize training-testing regimens and cross-validation schemes. |
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Registered: 2014-02-03 16:15 |
12. UMPIRE - UMPIRE provides tools to simulate realistic biological expression data. It includes additive and multiplicative noise, correlated expression, inactive genes, and a link to outcome data that incorporates the multi-hit cancer model. |
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Registered: 2014-02-03 16:37 |
13. OOMPA - OOMPA is a suite of R packages for the analysis of gene expression (RNA), proteomics profiling , and other high throughput molecular biology data. OOMPA uses S4 classes to construct object-oriented tools with a consistent user interface. |
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Registered: 2013-08-29 17:48 |
14. calibayesR - The package also provides a web-serivce interface to the CaliBayes system. See http://www.calibayes.ncl.ac.uk for more details. |
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Registered: 2009-11-30 09:36 |
15. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486. |
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Registered: 2013-11-21 21:46 |
16. IsoGeneGUI - A graphical user interface package to conduct a dose-response analysis of microarray |
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Registered: 2009-11-04 09:16 |
17. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties. |
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Registered: 2011-10-11 08:51 |
18. bclust - Bayesian clustering with variable selection is a fully automatic clustering method, designed for low-sample-size-high-dimensional situations. This might be regarded as a high-dimensional variant of the mclust package. |
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Registered: 2009-02-18 10:01 |
19. cvrcalc - A Cardiovascular Risk's Calculator by Scores |
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Registered: 2013-08-02 12:18 |
48 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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