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Topic :: Spatial Data & Statistics :: Ecological Analysis [Remove This Filter]
47 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. BioMod - BIOMOD is a computer platform for ensemble forecasting of species distributions, enabling the treatment of a range of methodological uncertainties in models and the examination of species-environment relationships.
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- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : Other Environment [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Activity Percentile: 97.37
Activity Ranking: 2.00
Registered: 2008-11-13 08:31 |
1. T-LoCoH - T-LoCoH is a method for constructing home ranges and exploring spatio-temporal patterns in movement data. Tailored for GPS data, it can produce maps of time use and behavior indices. General purpose functions including data cleaning and animations.
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Natural Language : English [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
- Topic : Time Series [Filter]
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Registered: 2013-03-12 23:47 |
2. mmSAR - mmSAR is a R package for the modelling of the Species-Area Relationship (SAR). The mmSAR package implement the multimodel SAR paradigm and provides ecologists with user friendly functions fit SAR models and calculate multimodel SAR inference.
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
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- Programming Language : R [Filter]
- Topic : Regression Models [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2009-08-25 12:11 |
3. modEvA - modEvA is an R package for species distribution model evaluation and analysis.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
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- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2014-04-04 11:51 |
4. Species Distribution Modelling tools - THIS PROJECT HAS MOVED to http://rforge.net/SDMTools/ ... Provided will be a set of tools for processing the outcomes of species distribution models.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2010-02-17 21:58 |
5. vegsoup - classes for phytosociology - S4 classes for vegetation-plot data (relevés) documenting community structure, sites data, taxonomy and spatial representation. Methods are provided for data manipulation, clustering, indicator species analysis and typesetting tables with LaTex.
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- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
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- Programming Language : R [Filter]
- Topic : Multivariate Statistics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2011-06-07 12:24 |
6. Functional diversity - The "Functional diversity" project is based on the FD package, which can compute different multidimensional FD indices. It also contains other useful tools for functional ecology, e.g. trait-based community assembly via maximum entropy models.
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- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
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- Topic : Multivariate Statistics : Matrix Manipulations [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2009-06-30 15:23 |
7. Bayesian Time-Strat. Population Analysis - BTSPAS provides advanced Bayesian methods to estimate abundance and run-timing from temporally-stratified Petersen mark-recapture experiments. Methods include hierarchical modelling of the capture probabilities and spline smoothing of the daily run size.
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- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Programming Language : Other [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2009-10-14 21:55 |
8. rGeoJAGS - An R interface for use of the GeoJAGS module within JAGS Bayesian analysis software. This extends JAGS through the inclusion of families of Gaussian Markov Random Field models. Functions to format spatial data for analysis within BUGS are also included
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- Development Status : 2 - Pre-Alpha [Filter]
- Environment : Other Environment [Filter]
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics : R Interfaces [Filter]
- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2015-02-06 13:03 |
9. Floating Grid Method - FGM is a method for exploring randomness of dyadic interactions at a range of spatial scales.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2013-10-14 12:26 |
10. bat - Biodiversity Assessment Tools - An R package useful for biodiversity assessment, including:
- Taxon, phylogenetic and functional dimensions of alpha and beta diversity
- Accumulation curves for all measures
- Diversity estimation from incomplete sampling
- Beta diversity partition
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
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- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2014-05-14 11:14 |
11. NDVI Time Series extraction and analysis - The routines extract automatically NDVI time series from different satellites (AVHRR, Spot Vegetation, MODIS) and provide tools to display and analyze them. Phenological metrics can be computed for every season as well as vegetation anomaly maps.
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
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Registered: 2011-06-23 07:05 |
12. dcr - Data Cloning in R - Data cloning (DC) uses Bayesian MCMC to make maximum likelihood inference of complex hierarchical models. The bundle includes basic infrastructure for DC with parallel computing support, and more specialized packages for ecology.
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- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
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- Topic : Bayesian Statistics [Filter]
- Topic : Optimization [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2009-08-17 16:25 |
13. OUwie - Calculates and compares rate differences of continuous character evolution under Brownian motion and a new set of Ornstein-Uhlenbeck (OU) models that allow the strength of selection and drift to vary across selective regimes.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Genetics : Phylogenetics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2011-07-13 13:38 |
14. Analysis of phenological digital imagery - The package phenopix provides functions to process digital images of a vegetation cover, depict greennes index trajectories and extract relevant phenological stages.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
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- Programming Language : R [Filter]
- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2014-09-23 08:50 |
15. Movement Analysis - Analysis of trajectory data. Compute home ranges, speed distributions and detect movement patterns based on the Brownian bridge movement model.
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- Development Status : 3 - Alpha [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
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- Programming Language : R [Filter]
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Registered: 2015-04-09 16:55 |
16. sampSurf - Sampling surface simulation - This package will allow the estimation of sampling surfaces over a spatial extent for use in assessing different areal sampling methods used in forestry and ecology.
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- Development Status : 3 - Alpha [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
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Registered: 2010-11-24 18:59 |
17. raster -- spatial data - The 'raster' package deals with basic spatial raster (grid) data access and manipulation. It defines raster classes; can deal with very large files (stored on disk); and includes standard raster functions such as overlay, aggregation, and merge.
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- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Classes for Spatial Data [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
- Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]
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Registered: 2008-11-02 05:32 |
18. SECR models in R using ADMB - The admbsecr package fits spatially explicit capture-recapture (SECR) models in which supplementary information on animal location is recorded by a passive detector. Parameter estimation is by maximum likelihood in ADMB.
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- Development Status : 2 - Pre-Alpha [Filter]
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- Programming Language : R [Filter]
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Registered: 2012-10-18 13:00 |
19. Rgis - Rgis is an incubator for developing spatial packages. It contains early work in progress. More mature fledglings of Rgis, that now have their own R-forge sites, are: raster, gdistance, remotesensing, and geosphere.
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- Development Status : 2 - Pre-Alpha [Filter]
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- Natural Language : English [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2008-09-13 03:08 |
47 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1> <2> <3>
