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54 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. CHNOSZ - A package for thermodynamic modeling in geochemistry and biochemistry, with functions for equilibrium activity diagrams and chemical affinities of reactions, supported by an extensive thermodynamic database and group additivity for proteins.
Development Status : 4 - Beta [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English [Filter] Operating System : OS Independent [Filter] Programming Language : R (Now Filtering) Topic : Bioinformatics (Now Filtering) Topic : Chemoinformatics [Filter]	Activity Percentile: 96.55 Activity Ranking: 2.00 Registered: 2011-05-13 20:48

1. RHRV - Package for carring out heart rate variability studies of ECG records

Development Status : 6 - Mature [Filter]
Intended Audience : Developers [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
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Programming Language : R (Now Filtering)
Topic : Bioinformatics (Now Filtering)

Activity Percentile: 86.21
Activity Ranking: 5.00
Registered: 2010-10-14 10:22

2. diveMove - diveMove is a package with tools to represent, visualize, filter, analyse, and summarize time-depth recorder (TDR) data. It also provides miscellaneous functions for handling location data.

Development Status : 5 - Production/Stable [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Natural Language : French [Filter]
Natural Language : Spanish [Filter]
Operating System : OS Independent [Filter]
Programming Language : R (Now Filtering)
Topic : Bioinformatics (Now Filtering)

Activity Percentile: 0.00
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Registered: 2009-10-22 17:20

3. Benchmarking genomic data integration - Comparison pipeline for multi-platform data integration algorithms for functional genomics studies. Provides tools to compare performance between publicly available implementations

Development Status : 4 - Beta [Filter]
Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) [Filter]
Environment : X11 Applications [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
Intended Audience : Other Audience [Filter]
License : OSI Approved : BSD License [Filter]
Natural Language : English [Filter]
Operating System : OS Independent [Filter]
Programming Language : R (Now Filtering)
Topic : Bioinformatics (Now Filtering)
Topic : Genetics [Filter]
Topic : Multivariate Statistics [Filter]

Activity Percentile: 0.00
Activity Ranking: 0.00
Registered: 2011-02-02 00:51

4. OrgMassSpecR: Organic Mass Spectrometry - Organic/biological mass spectrometry data analysis. The development version of OrgMassSpecR is on GitHub (https://github.com/OrgMassSpec) and the stable version is on CRAN (https://cran.r-project.org/). The R-Forge repository is an archive.
Development Status : 4 - Beta [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : BSD License [Filter] Natural Language : English [Filter] Operating System : OS Independent [Filter] Programming Language : R (Now Filtering) Topic : Bioinformatics (Now Filtering) Topic : Chemoinformatics [Filter]	Activity Percentile: 0.00 Activity Ranking: 0.00 Registered: 2009-04-28 20:04

5. polyploid - We provide tools for polyploid data, covering topics from genotype calling, over linkage mapping to haplotyping. Further we allow users to simulate own data sets for given genotypes and population structures.
Development Status : 2 - Pre-Alpha [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English [Filter] Operating System : POSIX : Linux [Filter] Programming Language : R (Now Filtering) Topic : Bioinformatics (Now Filtering) Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]	Activity Percentile: 0.00 Activity Ranking: 0.00 Registered: 2014-02-05 10:27

6. dnet - dnet is an open-source R package for integrative analysis of digitised data in terms of network, ontology and evolution, including: identification and visualisation of gene-active dynamic subnetworks; random walk with restart; and enrichment analysis

Development Status : 5 - Production/Stable [Filter]
Intended Audience : Developers [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
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Topic : Bioinformatics (Now Filtering)
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Activity Percentile: 0.00
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Registered: 2014-01-22 14:22

7. NameNeedle - Using Needleman-Wunsch to Match Sample Names
Development Status : 5 - Production/Stable [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English [Filter] Programming Language : R (Now Filtering) Topic : Bioinformatics (Now Filtering) Topic : Text [Filter]	Activity Percentile: 0.00 Activity Ranking: 0.00 Registered: 2014-02-03 16:21

8. missForest - The missForest package enables the user to perform straightforward missing value imputation on basically any kind of data. Additionally, the algorithm supplies the user with an out-of-bag imputation error estimate.

Development Status : 5 - Production/Stable [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Natural Language : German [Filter]
Programming Language : R (Now Filtering)
Topic : Bioinformatics (Now Filtering)
Topic : Machine Learning : Random Forests [Filter]
Topic : Multivariate Statistics : Missing Data [Filter]

Activity Percentile: 0.00
Activity Ranking: 0.00
Registered: 2011-05-18 08:28

9. TopKLists - The package includes tools for inference, aggregation, and visualization of multiple ranked lists. Consolidated information from two or more such lists comprising the same set of objects can be obtained. Incomplete rankings and partial lists are allowed.

Development Status : 4 - Beta [Filter]
Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) [Filter]
Environment : Win32 (MS Windows) [Filter]
Environment : X11 Applications [Filter]
Intended Audience : End Users/Desktop [Filter]
Natural Language : English [Filter]
Operating System : OS Independent [Filter]
Programming Language : C/C\+\+ [Filter]
Programming Language : R (Now Filtering)
Topic : Bioinformatics (Now Filtering)
Topic : Biostatistics & Medical Statistics [Filter]
Topic : Marketing & Business Analytics [Filter]

Activity Percentile: 0.00
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Registered: 2010-05-06 10:59

10. prepRISA - This package can be used to prepare ARISA data files for multivariate analysis.

Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) [Filter]
Environment : X11 Applications [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : OS Independent [Filter]
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Programming Language : R (Now Filtering)
Programming Language : Tcl [Filter]
Topic : Bioinformatics (Now Filtering)
Topic : Multivariate Statistics [Filter]

Activity Percentile: 0.00
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Registered: 2009-11-20 09:49

11. Parent-specific DNA copy numbers (abo) - Paired PSCBS: Parent-specific copy number in paired tumor-normal studies using circular binary segmentation (CBS). Packages in this project: PSCBS.
Development Status : 3 - Alpha [Filter] Development Status : 4 - Beta [Filter] Intended Audience : Developers [Filter] Intended Audience : End Users/Desktop [Filter] Natural Language : English [Filter] Operating System : OS Independent [Filter] Programming Language : R (Now Filtering) Topic : Bioinformatics (Now Filtering) Topic : Genetics [Filter]	Activity Percentile: 0.00 Activity Ranking: 0.00 Registered: 2009-10-20 01:21

12. RMesquite - RMesquite establishes interoperability between Mesquite (http://mesquiteproject.org) and R. It exposes Mesquite methods transparently as R functions that consume and provide native R data types, and converts seamlessly between Java and R data types.

Development Status : 3 - Alpha [Filter]
Intended Audience : Developers [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
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Programming Language : Java [Filter]
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Topic : Bioinformatics (Now Filtering)
Topic : Genetics : Phylogenetics [Filter]
Topic : Multivariate Statistics [Filter]

Activity Percentile: 0.00
Activity Ranking: 0.00
Registered: 2008-07-17 03:57

13. SegAnnot - SegAnnot calculates the least squares segmentation for piecewise constant annotated noisy signals.

Development Status : 5 - Production/Stable [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : OS Independent [Filter]
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Programming Language : R (Now Filtering)
Topic : Bioinformatics (Now Filtering)
Topic : Optimization : Mathematical Programming : Global Optimization [Filter]
Topic : Time Series [Filter]

Registered: 2012-11-27 16:58

14. CellMix - Resources for performing gene expression deconvolution in R, i.e. estimating cell proportions and/or cell-specific gene expression from global gene expression measured in heterogeneous samples. Currently hosted packages: csSAM and CellMix packages.

Intended Audience : Developers [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
Natural Language : English [Filter]
Operating System : OS Independent [Filter]
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Programming Language : R (Now Filtering)
Topic : Bioinformatics (Now Filtering)
Topic : Genetics [Filter]
Topic : Software Development [Filter]

Activity Percentile: 0.00
Activity Ranking: 0.00
Registered: 2013-04-11 08:27

15. XGR - eXploring Genomic Relations (XGR) at the gene and SNP level through enrichment analysis, similarity analysis and network analysis

Development Status : 5 - Production/Stable [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS [Filter]
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Programming Language : R (Now Filtering)
Topic : Bioinformatics (Now Filtering)
Topic : Database [Filter]
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Activity Percentile: 0.00
Activity Ranking: 0.00
Registered: 2016-04-01 13:46

16. Continuous Character Transitions - maticce: Mapping Transitions In Continuous Character Evolution This project provides tools for an information-theoretic approach to estimating the probability of continuous character transitions on phylogenetic trees.
Development Status : 4 - Beta [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English [Filter] Operating System : OS Independent [Filter] Programming Language : R (Now Filtering) Topic : Bioinformatics (Now Filtering) Topic : Genetics : Phylogenetics [Filter]	Activity Percentile: 0.00 Activity Ranking: 0.00 Registered: 2008-11-07 19:39

17. DNA Microarray Datasets - Bioconductor offers GEOquery and ArrayExpress for accessing DNA microarray data in GEO and ArrayExpress. It also offers microarray data packages. This project is an additional container of microarray data packages for depositors who prefer to use R-forge.
Development Status : 1 - Planning [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter] Natural Language : English [Filter] Operating System : Microsoft : Windows : Windows Vista [Filter] Programming Language : R (Now Filtering) Topic : Bioinformatics (Now Filtering) Topic : Datasets [Filter]	Activity Percentile: 0.00 Activity Ranking: 0.00 Registered: 2010-02-09 15:03

18. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition.

Environment : Console (Text Based) [Filter]
Intended Audience : Developers [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS [Filter]
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux [Filter]
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Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]

Registered: 2013-01-21 21:13

19. CRImage - CRImage is a package to process and analyze biological images.
Development Status : 4 - Beta [Filter] Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English [Filter] Programming Language : R (Now Filtering) Topic : Bioinformatics (Now Filtering) Topic : Biostatistics & Medical Statistics [Filter]	Activity Percentile: 0.00 Activity Ranking: 0.00 Registered: 2010-06-27 11:26

54 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1> <2> <3>