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45 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. OUwie - Calculates and compares rate differences of continuous character evolution under Brownian motion and a new set of Ornstein-Uhlenbeck (OU) models that allow the strength of selection and drift to vary across selective regimes. |
- Development Status : 4 - Beta [Filter]
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- Topic : Genetics : Phylogenetics [Filter]
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Registered: 2011-07-13 13:38 |
1. Species Distribution Modelling - sdm is an extendable framework to develop species distributions models using individual and community-based approaches, generate ensembles of models, evaluate the models, and predict species potential distributions in space and time. |
- Development Status : 4 - Beta [Filter]
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Registered: 2014-05-26 16:09 |
2. simecol - Ecological Models with R - simecol allows to implement ecological models (ODEs, IBMs, ...) using a template-like object-oriented stucture. It helps to organize scenarios and may also be useful for other areas. |
- Development Status : 4 - Beta [Filter]
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Registered: 2008-02-20 20:34 |
3. Gradient forest - Detecting biological composition patterns along environmental gradients from site-by-species ecological data. Package gradientForest calculates the gradients from split-point importances provided by auxiliary package extendedForest, based on randomForest. |
- Development Status : 4 - Beta [Filter]
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Registered: 2011-01-06 08:05 |
4. vegan - Community Ecology Package - 'vegan' is a CRAN package for the analysis of ecological communities. It has tools for analysing ecological diversity, and for the multivariate analysis of communities (NMDS, pCCA, pRDA etc.) - Development on R-Forge discontinued, go to https://github.com/vegandevs/ |
- Development Status : 5 - Production/Stable [Filter]
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Registered: 2007-09-05 13:59 |
5. dcr - Data Cloning in R - Data cloning (DC) uses Bayesian MCMC to make maximum likelihood inference of complex hierarchical models. The bundle includes basic infrastructure for DC with parallel computing support, and more specialized packages for ecology. |
- Development Status : 5 - Production/Stable [Filter]
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Registered: 2009-08-17 16:25 |
6. sampSurf - Sampling surface simulation - This package will allow the estimation of sampling surfaces over a spatial extent for use in assessing different areal sampling methods used in forestry and ecology. |
- Development Status : 3 - Alpha [Filter]
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Registered: 2010-11-24 18:59 |
7. grainscape - Create grains of connectivity and minimum planar graph models to calculate effective distances for landscape connectivity at multiple scales.
**Development of this package has moved to GitHub (https://achubaty.github.io/grainscape).** |
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Registered: 2012-03-07 12:18 |
8. Functional diversity - The "Functional diversity" project is based on the FD package, which can compute different multidimensional FD indices. It also contains other useful tools for functional ecology, e.g. trait-based community assembly via maximum entropy models. |
- Development Status : 5 - Production/Stable [Filter]
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- Topic : Multivariate Statistics : Matrix Manipulations [Filter]
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Registered: 2009-06-30 15:23 |
9. to_be_removed - -- |
- Development Status : 4 - Beta [Filter]
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Registered: 2010-08-09 10:48 |
10. Movement Analysis - Analysis of trajectory data. Compute home ranges, speed distributions and detect movement patterns based on the Brownian bridge movement model. |
- Development Status : 3 - Alpha [Filter]
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Registered: 2015-04-09 16:55 |
11. rGeoJAGS - An R interface for use of the GeoJAGS module within JAGS Bayesian analysis software. This extends JAGS through the inclusion of families of Gaussian Markov Random Field models. Functions to format spatial data for analysis within BUGS are also included |
- Development Status : 2 - Pre-Alpha [Filter]
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Registered: 2015-02-06 13:03 |
12. Remote sensing - A collection of functions for the, pre-processing and interpretation of satellite images. Including the computation of vegetation indices and image classification. |
- Development Status : 2 - Pre-Alpha [Filter]
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Registered: 2009-02-07 07:14 |
13. mmSAR - mmSAR was a R package for the modelling of the Species-Area Relationship (SAR). It is now deprecated and has been replaced by the "sars" R package, available at https://cran.r-project.org/web/packages/sars/index.html |
- Development Status : 4 - Beta [Filter]
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Registered: 2009-08-25 12:11 |
14. Analysis of phenological digital imagery - The package phenopix provides functions to process digital images of a vegetation cover, depict greennes index trajectories and extract relevant phenological stages. |
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Registered: 2014-09-23 08:50 |
15. r2dRue - 2dRUE is a methodology to make a diagnostic of land condition in a large territory during a given time period. Was developed under the DeSurvey IP. |
- Development Status : 3 - Alpha [Filter]
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Registered: 2010-04-20 22:26 |
16. Models for Data from Unmarked Animals - This is a stub. Development now continues at http://github.com/ianfiske/unmarked.
unmarked analyzes wildlife data arising from many popular wildlife sampling techniques using 2-stage hierarchical models. |
- Development Status : 4 - Beta [Filter]
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Registered: 2007-07-25 14:05 |
17. bat - Biodiversity Assessment Tools - An R package useful for biodiversity assessment, including:
- Taxon, phylogenetic and functional dimensions of alpha and beta diversity
- Accumulation curves for all measures
- Diversity estimation from incomplete sampling
- Beta diversity partition |
- Development Status : 4 - Beta [Filter]
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Registered: 2014-05-14 11:14 |
18. modEvA - modEvA is an R package for species distribution model evaluation and analysis. |
- Development Status : 4 - Beta [Filter]
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Registered: 2014-04-04 11:51 |
19. fuzzySim - fuzzySim is an R package for calculating fuzzy similarity in species occurrence patterns. |
- Development Status : 4 - Beta [Filter]
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Registered: 2014-02-27 18:53 |
45 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>