Software Map
Project Tree
Now limiting view to projects in the following categories:
Development Status :: 4 - Beta [Remove This Filter]
Operating System :: OS Independent [Remove This Filter]
Intended Audience :: End Users/Desktop [Remove This Filter]
60 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. Cytangle - Analyze single cell mass cytometry data |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : Artistic License [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Cluster Analysis [Filter]
- Topic : Multivariate Statistics [Filter]
|
Activity Percentile: 81.25
Registered: 2016-10-26 12:51 |
1. Mutoss - Mutoss (multiple hypotheses testing in an open software system) aims at providing a unified, extensible interface covering a large spectrum of multiple hypotheses testing procedures in R. Features a GUI and a simulation tool. Funded by PASCAL2. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : Java [Filter]
- Programming Language : R [Filter]
- Topic : Education : GUI [Filter]
- Topic : Multivariate Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-02-11 12:32 |
2. Species Distribution Modelling - sdm is an extendable framework to develop species distributions models using individual and community-based approaches, generate ensembles of models, evaluate the models, and predict species potential distributions in space and time. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Environment : Web Environment [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Machine Learning [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2014-05-26 16:09 |
3. mmSAR - mmSAR was a R package for the modelling of the Species-Area Relationship (SAR). It is now deprecated and has been replaced by the "sars" R package, available at https://cran.r-project.org/web/packages/sars/index.html |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Regression Models [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2009-08-25 12:11 |
4. gsDesign: Group Sequential Design - Generates group sequential designs using alpha- and beta-spending functions or Wang-Tsiatis (e.g., O'Brien-Fleming and Pocock) boundary families. Many plotting capabilities as well as non-binding futility rules are available. Easily extended. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2008-08-31 13:07 |
5. SBML Model Package - A collection of SBML Models with some experimental and simulated datasets. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
|
Activity Percentile: 0.00
Registered: 2009-12-15 12:39 |
6. waveslim: Wavelet methods for 1/2/3D - Basic wavelet routines for the processing/analysis/inference of time series, images and 3D arrays. The code provided here is based on Percival and Walden (2000); Gencay, Selcuk and Whitcher (2001); Kingsbury (1999); and Selesnick (200?). |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Econometrics [Filter]
- Topic : Finance [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2009-02-26 17:20 |
7. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-10-11 08:51 |
8. lava [MOVED TO GITHUB] - MOVED TO GITHUB |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Multivariate Statistics : Latent Variable Approaches [Filter]
- Topic : Multivariate Statistics : Linear Models [Filter]
|
Activity Percentile: 0.00
Registered: 2009-09-08 13:22 |
9. Markov decision processes (MDPs) in R - Create and optimize MDPs with discrete time steps and state space. Both normal MDPs and hierarchical MDPs can be considered. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Optimization [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2009-06-08 12:06 |
10. DREAM: global adaptive MCMC - DiffeRential Evolution Adaptive Metropolis (DREAM). Efficient global MCMC even in high-dimensional spaces. Developed by J.A. Vrugt, C.J.F. ter Braak et al. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bayesian Statistics : General Model Fitting [Filter]
- Topic : Machine Learning : Bayesian Methods [Filter]
- Topic : Optimization : General Purpose Continuous Solvers [Filter]
|
Activity Percentile: 0.00
Registered: 2009-09-22 05:35 |
11. Analysis of Count Time Series - R package which provides likelihood-based methods for model fitting and assessment, prediction and intervention analysis of count time series following generalized linear models. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Econometrics : Structural Change [Filter]
- Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2013-04-04 13:48 |
12. Models for Data from Unmarked Animals - This is a stub. Development now continues at http://github.com/ianfiske/unmarked.
unmarked analyzes wildlife data arising from many popular wildlife sampling techniques using 2-stage hierarchical models. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Regression Models [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Registered: 2007-07-25 14:05 |
13. ESM - ESM – Ecological Measures of Specificity . Provides several ecological specificity / host range indicators |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Robust Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2009-11-07 16:56 |
14. bat - Biodiversity Assessment Tools - An R package useful for biodiversity assessment, including:
- Taxon, phylogenetic and functional dimensions of alpha and beta diversity
- Accumulation curves for all measures
- Diversity estimation from incomplete sampling
- Beta diversity partition |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2014-05-14 11:14 |
15. VisCount - R package for training and evaluating visual count estimates |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
|
Activity Percentile: 0.00
Registered: 2014-07-07 14:36 |
16. TopKLists - The package includes tools for inference, aggregation, and visualization of multiple ranked lists. Consolidated information from two or more such lists comprising the same set of objects can be obtained. Incomplete rankings and partial lists are allowed. |
- Development Status : 4 - Beta (Now Filtering)
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Marketing & Business Analytics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-05-06 10:59 |
17. DeadCanMove - Locating roadkill hotspots is key to mitigate road impacts on wildlife, but study design can affect hotspot definition. The DeadCanMove R package contains functions to estimate how sampling scheme may affect the spatial accuracy of hotspot identification. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Datasets [Filter]
- Topic : Multivariate Statistics : Matrix Manipulations [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2014-04-01 18:15 |
18. splinesurv - A package containing utilities for nonparametric Bayesian analysis of clustered survival data. The baseline hazard function and frailty density are modeled using penalized B-splines. Regression and spline parameters are estimated via MCMC. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Other/Nonlisted Topic [Filter]
- Topic : Regression Models [Filter]
|
Activity Percentile: 0.00
Registered: 2008-01-08 16:50 |
19. fuzzySim - fuzzySim is an R package for calculating fuzzy similarity in species occurrence patterns. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2014-02-27 18:53 |
60 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>