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724 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<19>
360. Phylobase Extension - This package provides classes and methods which help read/write/manipulate branch-annotated phylogenetic trees (SIMMAP-format) and supports for a few other extra phylogenetic tree features (like tree weight).
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- Development Status : 3 - Alpha [Filter]
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- Topic : Genetics : Phylogenetics [Filter]
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Registered: 2011-04-26 02:20 |
361. Genome-wide analysis using MOSS - Performs genome-wide analysis of dense SNP array data using the mode oriented stochastic search (MOSS) algorithm in a case-control design. Includes preprocessing of the data from Plink format to the format required by the MOSS algorithm. |
- Development Status : 3 - Alpha [Filter]
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- Programming Language : Fortran [Filter]
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- Topic : Bayesian Statistics [Filter]
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- Topic : Graphical Models [Filter]
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Registered: 2011-01-07 17:53 |
362. scimapClient - This package sends anonymized package usage information to http://scisoft-net-map.isri.cmu.edu. You can help the creators of scientific software packages show the usage and impact of their software to employers, funding agencies, tenure committees, etc. |
- Development Status : 4 - Beta [Filter]
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- License : OSI Approved : BSD License [Filter]
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- Topic : Connectivity [Filter]
- Topic : High Performance Computing : Profiling Tools [Filter]
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Registered: 2015-01-12 16:27 |
363. Remote sensing - A collection of functions for the, pre-processing and interpretation of satellite images. Including the computation of vegetation indices and image classification. |
- Development Status : 2 - Pre-Alpha [Filter]
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2009-02-07 07:14 |
364. gbm - Generalized Boosted Models. Adding additional functionality to the gbm package, including additional robust regression methods, a new binomial classification method, and multinomial classification. |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
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- Topic : Machine Learning : Boosting [Filter]
- Topic : Regression Models [Filter]
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Registered: 2009-06-02 16:27 |
365. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files. |
- Development Status : 5 - Production/Stable [Filter]
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- Environment : X11 Applications [Filter]
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- Topic : Bioinformatics : Visualization [Filter]
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Registered: 2010-01-08 16:59 |
366. diagnosis - An R package for evaluation of the accuracy of diagnostic tests or biomarkers for classification (screening or diagnosis) and prediction (risk or prognosis). |
- Development Status : 1 - Planning [Filter]
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- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
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Registered: 2009-03-08 23:28 |
367. glmx: Generalized Linear Models Extended - Extensions for generalized linear models (GLMs), especially for binary responses, allowing for parametric links or heterogeneity in the latent variables. |
- Development Status : 4 - Beta [Filter]
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- Topic : Econometrics : Microeconometrics [Filter]
- Topic : Regression Models [Filter]
- Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
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Registered: 2011-04-12 13:09 |
368. MethComp - Functions for analysis of method comparison studies. |
- Development Status : 4 - Beta [Filter]
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Registered: 2009-02-19 23:41 |
369. ADEA - Data Envelopment Analysis (DEA) seeks to compare the relative efficiency of a group's decision units (DMU).
This package provides additional features to support variable selection, restricted DEA models, and leverage analysis.
The selection of variables in DEA is a cornerstone, because efficiency results hardly depend on that selection. A measured, called load, allows handling that selection. In the package to do it two step-by-step functions are provided.
Sometimes the reasons for external analysis require that the contributions of variables to the DEA be restricted in a range. Another function is also provided for this purpose.
Another feature provided allows us to find which DMUs cause the most significant changes in the results so that we can handle them properly.
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- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
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Registered: 2021-08-04 10:52 |
370. polyploid - We provide tools for polyploid data, covering topics from genotype calling, over linkage mapping to haplotyping. Further we allow users to simulate own data sets for given genotypes and population structures. |
- Development Status : 2 - Pre-Alpha [Filter]
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- Topic : Bioinformatics [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
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Registered: 2014-02-05 10:27 |
371. punitroots: Panels With Unit Roots - Tests for unit roots in panels of (economic) time series, with and without cross-sectional dependence. |
- Development Status : 1 - Planning [Filter]
- Environment : Console (Text Based) [Filter]
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- Topic : Econometrics [Filter]
- Topic : Finance : Time Series [Filter]
- Topic : Time Series [Filter]
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Registered: 2011-04-30 17:48 |
372. Probability distributions - Provide a handbook on probability distributions with plenty of code example for plotting, fitting and/or using probability distributions. |
- Development Status : 4 - Beta [Filter]
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Registered: 2009-02-14 11:04 |
373. gRaviopt - Implementation of an stochastic agent-based optimisation algorithm using the laws of gravity and motion |
- Development Status : 3 - Alpha [Filter]
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- Topic : Optimization : Mathematical Programming : Global Optimization [Filter]
- Topic : Optimization : Mathematical Programming : Stochastic Programming [Filter]
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Registered: 2011-05-05 12:11 |
374. Quadratic programming modeling language - An intuitive modeling language for quadratic programs, and functions to generate the standard form matrices required to use solve.QP(). |
- Development Status : 3 - Alpha [Filter]
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- Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]
- Topic : Software Development : Code Generators [Filter]
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Registered: 2011-04-22 14:44 |
375. qrng - Functions for generating (randomized) quasi-random numbers in R (in arbitrary dimensions) |
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Registered: 2014-12-05 19:22 |
376. openrepgrid - The openrepgrid package provides means for numerical analysis and high-quality graphical repesentation of repertory grids - a data collection method used in psychological research. |
- Development Status : 3 - Alpha [Filter]
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- Topic : Multivariate Statistics : Visualising Multivariate Data : Graphical Procedures [Filter]
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Registered: 2010-10-27 15:55 |
377. cardidates - Peaks in Environm. Series - cardidates: Methods for Peak Identification in Environmental Time Series |
- Development Status : 4 - Beta [Filter]
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Registered: 2008-12-12 11:07 |
378. Processing of respiration chamber data - This repository is deprecated.
Please, use the current version at https://github.com/bgctw/RespChamberProc
CO2 and water vapour exchange fluxes between a surface and the atmosphere at the meter scale is measured by chambers. Modelling the gas concentration change within a chamber requires adequate protocols of calculation and error treatment. |
- Development Status : 4 - Beta [Filter]
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Registered: 2014-11-28 08:20 |
379. RevoExts - RevoExts is a project for open-source, third-party packages extending Revolution Analytics' RevoScaleR. |
- Development Status : 2 - Pre-Alpha [Filter]
- Development Status : 3 - Alpha [Filter]
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Registered: 2011-05-09 17:31 |
724 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<19>