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762 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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400. GWAtoolbox - An R-package implemented for genome-wide association studies. The main feature is very vast quality check of data before meta-analysis. It provides an extensive list of quality statistics presented using easy-to-use DHTML and graphical outputs. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
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- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Medical Science [Filter]
- Topic : Genetics [Filter]
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Registered: 2011-03-23 10:20 |
401. solaR - Calculation methods of solar radiation and performance of photovoltaic systems from daily and intradaily irradiation data sources. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Programming Language : R (Now Filtering)
- Topic : Computational Physics [Filter]
- Topic : Environmetrics [Filter]
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Registered: 2011-03-24 22:51 |
402. miRtest - This package provides tests for an effect of miRNAs between conditions. Information on miRNA and mRNA expression and target prediction is merged to generate p-values describing how likely differences in miRNA regulation occur between two groups. |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Multivariate Statistics : Multivariate Distributions [Filter]
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Registered: 2011-03-24 15:26 |
403. list - Statistical Methods for the Item Count Technique and List Experiment |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Econometrics : Further Regression Models [Filter]
- Topic : Multivariate Statistics [Filter]
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Registered: 2011-04-16 20:16 |
404. Plant Growth Analysis - Plant Growth Analysis tools for R. It has tools to calculate Relative Growth Rate, Leaf Area Ratio, Leaf Specific Area, Leaf Weight Ratio, Unity Leaf Ratio, Root-Shoot Allometry. |
- Development Status : 3 - Alpha [Filter]
- Environment : Other Environment [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
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Registered: 2011-04-04 14:59 |
405. NeuroSpatCo - The package is used to search for patterns of organization in human prefrontal cortex of both horizontal (cell body) and vertical plane (minicolumns). |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Other Environment [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers [Filter]
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- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Natural Language : Spanish [Filter]
- Operating System : MacOS [Filter]
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- Operating System : POSIX : Linux [Filter]
- Programming Language : R (Now Filtering)
- Programming Language : Tcl [Filter]
- Topic : Cluster Analysis : Other Cluster Algorithms [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2011-05-10 20:54 |
406. AFLP - A package for the normalisation on classification of AFLP (Amplification Fragment Length Polymorphism) data. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Genetics : Population Genetics [Filter]
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Registered: 2011-03-02 11:24 |
407. Phylobase Extension - This package provides classes and methods which help read/write/manipulate branch-annotated phylogenetic trees (SIMMAP-format) and supports for a few other extra phylogenetic tree features (like tree weight).
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- Development Status : 3 - Alpha [Filter]
- Intended Audience : Developers [Filter]
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- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Topic : Genetics : Phylogenetics [Filter]
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Registered: 2011-04-26 02:20 |
408. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
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- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Genetics [Filter]
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Registered: 2010-01-08 16:59 |
409. glmx: Generalized Linear Models Extended - Extensions for generalized linear models (GLMs), especially for binary responses, allowing for parametric links or heterogeneity in the latent variables. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Econometrics : Microeconometrics [Filter]
- Topic : Regression Models [Filter]
- Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
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Registered: 2011-04-12 13:09 |
410. survGenesInterim - Simulation of survival studies based on simulated gene expression level and patient data. Includes functions to generate such data. Resulting error and power rate can be visualized. Can be used for sample size or power estimation when planning a study. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Medical Science [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Multivariate Statistics : Supervised Classification and Discriminant Analysis [Filter]
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Registered: 2011-04-19 11:00 |
411. mediation - An important goal of social science research is the analysis of causal mechanisms, where mediation analysis is a common tool. We provide tools for mediation analysis that span different models as well tools for sensitivity analyses. |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Regression Models [Filter]
- Topic : Social Sciences [Filter]
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Registered: 2011-04-19 18:26 |
412. punitroots: Panels With Unit Roots - Tests for unit roots in panels of (economic) time series, with and without cross-sectional dependence. |
- Development Status : 1 - Planning [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Econometrics [Filter]
- Topic : Finance : Time Series [Filter]
- Topic : Time Series [Filter]
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Registered: 2011-04-30 17:48 |
413. gRaviopt - Implementation of an stochastic agent-based optimisation algorithm using the laws of gravity and motion |
- Development Status : 3 - Alpha [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
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- Programming Language : R (Now Filtering)
- Topic : Optimization : Mathematical Programming : Global Optimization [Filter]
- Topic : Optimization : Mathematical Programming : Stochastic Programming [Filter]
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Registered: 2011-05-05 12:11 |
414. Quadratic programming modeling language - An intuitive modeling language for quadratic programs, and functions to generate the standard form matrices required to use solve.QP(). |
- Development Status : 3 - Alpha [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
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- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]
- Topic : Software Development : Code Generators [Filter]
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Registered: 2011-04-22 14:44 |
415. RevoExts - RevoExts is a project for open-source, third-party packages extending Revolution Analytics' RevoScaleR. |
- Development Status : 2 - Pre-Alpha [Filter]
- Development Status : 3 - Alpha [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows : Windows Vista [Filter]
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Registered: 2011-05-09 17:31 |
416. ggcluster - plot cluster data w/ ggplot2 - Tools for creating cluster plots, tree plots and dendrograms using ggplot.
ggcluster provides a convenient, generic extractor function that can handle dendrogram, tree, kmeans, hclust and Mclust objects. |
- Development Status : 3 - Alpha [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Programming Language : R (Now Filtering)
- Topic : Cluster Analysis [Filter]
- Topic : Graphics : Plotting [Filter]
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Registered: 2011-07-13 08:40 |
417. Clustering using convex fusion penalties - An R/C++ implementation of the clusterpath algorithm described in Hocking et al. 2011, for robust convex clustering using sparsity-inducing fusion penalties. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Python [Filter]
- Programming Language : R (Now Filtering)
- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Machine Learning : Regularized and Shrinkage Methods [Filter]
- Topic : Optimization [Filter]
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Registered: 2011-05-09 12:56 |
418. Gauss-Seidel Estimation of GLMM - This project implements a block-wise Gauss-Seidel (GS) algorithm to fit Generalized Linear Mixed Models (GLMMs). The GS algorithm allows for a significant performance increase and memory saving. |
- Development Status : 3 - Alpha [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Regression Models [Filter]
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Registered: 2011-05-11 13:44 |
419. Partial Discharges clustering - Partial discharge measurements analysis may determine the existence of defects. This package provides several tools for feature generation, exploratory graphical analysis, clustering and variable importance quantification for partial discharge signals. |
- Development Status : 3 - Alpha [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English [Filter]
- Programming Language : R (Now Filtering)
- Topic : Computational Physics [Filter]
- Topic : Multivariate Statistics : Unsupervised Classification : Cluster Analysis [Filter]
- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
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Registered: 2011-05-16 08:51 |
762 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<21>