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316 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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260. Classification of RNA Structure Change - R package for the autonomous detection and classification of RNA structure change (riboSNitches) in chemical mapping data. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Machine Learning : Random Forests [Filter]
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Registered: 2015-09-02 17:28 |
261. Rigorous Analytics - Software for the quantitative analysis of medical imaging data. Medical imaging data formats include DICOM, AFNI, ANALYZE and NIfTI. |
- Development Status : 3 - Alpha [Filter]
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
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- License : OSI Approved : BSD License [Filter]
- Natural Language : English [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
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Registered: 2010-01-18 10:18 |
262. Roxygen - Roxygen is a Doxygen-like documentation system for R; allowing in-source specification of Rd files, collation and namespace directives. Roclets (modular drivers) provide an extensibility layer. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Software Development [Filter]
- Topic : Text : Documentation [Filter]
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Registered: 2008-04-22 13:05 |
263. linprog: Linear Programming/Optimization - This package can be used to solve Linear Programming / Linear optimization problems by using the simplex algorithm. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Programming Language : R (Now Filtering)
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
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Registered: 2009-12-25 16:29 |
264. Advance Clustering - S4 Object Oriented for Clustering. Right now still provide for Fuzzy Clustering Analysis. Fuzzy Clustering method that provided Fuzzy C-Means, Gustafson Kessel (Babuska Version). Also provided with several validation index, & consensus clustering. |
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : System Administrators [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Programming Language : R (Now Filtering)
- Topic : Cluster Analysis : Partitioning Clustering [Filter]
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Registered: 2016-08-12 13:39 |
265. gsDesign: Group Sequential Design - Generates group sequential designs using alpha- and beta-spending functions or Wang-Tsiatis (e.g., O'Brien-Fleming and Pocock) boundary families. Many plotting capabilities as well as non-binding futility rules are available. Easily extended. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics [Filter]
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Registered: 2008-08-31 13:07 |
266. Robust Horvitz-Thompson Estimation - "rhte": Robust Horvitz-Thompson estimation. The package offers robust methods in order to estimate the mean, total, and ratio (among others) for complex survey samples. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Operating System : Microsoft : Windows [Filter]
- Programming Language : R (Now Filtering)
- Topic : Other/Nonlisted Topic [Filter]
- Topic : Robust Statistics [Filter]
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Registered: 2012-01-12 12:49 |
267. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Operating System : MacOS [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : QTL Mapping [Filter]
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Registered: 2009-10-07 19:54 |
268. a logging package - the logging package is a port of the ubiquitous log4j.
it implements hierarchical logging, multiple handlers at a single logger, formattable log records... |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Programming Language : R (Now Filtering)
- Topic : Text [Filter]
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Registered: 2010-01-22 15:47 |
269. Symphony in R - An R interface to the SYMPHONY MILP solver. |
- Development Status : 4 - Beta [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
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Registered: 2007-12-17 15:44 |
270. Non-Interactive Spatial Tools for Raster - S3 classes and methods for manipulation with georeferenced raster data: reading/writing, processing, multi-panel visualization.
This is deprecated version with compiled binaries. Actual sources are at GitHub: https://github.com/nplatonov/ursa. See CRAN for binaries. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Natural Language : Russian [Filter]
- Programming Language : R (Now Filtering)
- Topic : Spatial Data & Statistics [Filter]
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Registered: 2017-03-17 09:29 |
271. Evolution simulation and classification - After measuring gene frequencies of modern populations that have a common ancestor, we estimate ancestral allele frequency and selection state for each gene. A bayesian model is used and verified using the included simulator. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : French [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : Population Genetics [Filter]
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Registered: 2009-07-30 17:27 |
272. Bayesian Fractional Polynomials - The package implements the Bayesian paradigm for fractional polynomial models under the assumption of normally distributed error terms. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
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Registered: 2009-09-23 10:25 |
273. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bayesian Statistics [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics [Filter]
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Registered: 2011-10-11 08:51 |
274. h5R An interface to hdf5 files from R - This project aims to provide a simple read/write interface to HDF 5 files. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
- Operating System : MacOS [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Connectivity [Filter]
- Topic : High Performance Computing [Filter]
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Registered: 2010-04-09 23:53 |
275. Hierarchical Generalized Linear Models - The aim of the project is to develop a series of packages, including the hglm package, which implement the estimation algorithm of different random effects models based on the hierarchical likelihood theory. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R (Now Filtering)
- Topic : Genetics : QTL Mapping [Filter]
- Topic : Multivariate Statistics : Linear Models [Filter]
- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
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Registered: 2009-10-02 07:07 |
276. Single-Case Data Analyses - A collection of procedures for analysing single-case data. Some procedures support multiple-baseline designs. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Natural Language : English [Filter]
- Programming Language : R (Now Filtering)
- Topic : Education [Filter]
- Topic : Time Series [Filter]
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Registered: 2016-06-23 08:49 |
277. Genotype Database Framework - GT.DB is a database framework for efficiently managing genome-wide genotype datasets (i.e. 10^6 or more biallelic markers, 1000s of samples), as well as underlying raw data and complex phenotype data, tightly integrated with R libraries for analysis. |
- Development Status : 4 - Beta [Filter]
- Environment : Other Environment [Filter]
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Other [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Database [Filter]
- Topic : Genetics [Filter]
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Registered: 2009-09-17 00:13 |
278. cran2deb - debianize CRAN - cran2deb automatically converts CRAN packages for R into Debian packages, handling dependency matching and package updates nicely.
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : No Input/Output (Daemon) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Operating System : POSIX : Linux [Filter]
- Programming Language : R (Now Filtering)
- Programming Language : Unix Shell [Filter]
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Registered: 2008-09-11 19:33 |
279. lossDev - A Bayesian time series loss development model. Features include skewed-t distribution with time-varying scale parameter, Reversible Jump MCMC for determining the functional form of the consumption path, and a structural break in this path. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
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Registered: 2009-10-28 14:53 |
316 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<14>