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Topic > Bioinformatics

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10 projects in result set.

0. SBML Model Package - A collection of SBML Models with some experimental and simulated datasets.
Development Status : 4 - Beta (Now Filtering) Environment : Console (Text Based) (Now Filtering) Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter] Operating System : OS Independent [Filter] Programming Language : R [Filter] Topic : Bioinformatics [Filter]	Activity Percentile: 0.00 Registered: 2009-12-15 12:39

1. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp

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Registered: 2013-05-29 18:34

2. TopKLists - The package includes tools for inference, aggregation, and visualization of multiple ranked lists. Consolidated information from two or more such lists comprising the same set of objects can be obtained. Incomplete rankings and partial lists are allowed.

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Registered: 2010-05-06 10:59

3. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association.

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Registered: 2012-08-10 08:48

4. vcf2geno: reading VCF made easy - Efficiently Read Variant Call Format (VCF) into R

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Registered: 2012-08-22 01:29

5. Corbi - A collection of bioinformatics tools for general purposes such as network query, protein structure alignment, gene expression analysis.

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Registered: 2011-09-26 05:04

6. Benchmarking genomic data integration - Comparison pipeline for multi-platform data integration algorithms for functional genomics studies. Provides tools to compare performance between publicly available implementations

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Registered: 2011-02-02 00:51

7. RpepXML - R pepXML is an R interface to the pepXML standard for MSMS data identification. It allows pepXML files to be imported into R and for easy manipulation and filtering.

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Registered: 2010-09-03 21:34

8. aroma.* packages [MOVED TO GITHUB] - This repository and all of its packages have been moved to https://github.com/HenrikBengtsson/

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Registered: 2009-05-19 20:01

9. Variant Pattern Analyzer - VPA (Variant Pattern Analyzer) is an R package for prioritizing variants with user-specified frequency pattern from multiple study subjects in next generation sequencing study.

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Registered: 2011-08-05 14:30