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62 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. geneNetBP - The geneNetBP package implements methods to predict, quantify and visualize system-wide changes in beliefs after absorbing evidence in genotype-phenotype networks inferred from eQTL data.
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- Development Status : 3 - Alpha [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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Registered: 2015-11-16 19:01 |
1. SMfSB - R code associated with the second and third editions of the book Stochastic Modelling for Systems Biology, by Darren J Wilkinson, published by Chapman & Hall/CRC Press.
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- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2011-02-18 14:08 |
2. Bayesian Estimation and Model Checking - This package mainly deals with generalized linear spatial models in Bayesian way for estimation, prediction and model checking.
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- Development Status : 4 - Beta [Filter]
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- Operating System : MacOS [Filter]
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics [Filter]
- Topic : Multivariate Statistics [Filter]
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
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Registered: 2011-08-18 03:20 |
3. shp2graph - This project provides functions to convert a "spatial" object of a road network to a "graph-class" or "igraph-class" object, which makes "igraph", "graph" and "RBGL" available for analysing it.
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- Development Status : 4 - Beta [Filter]
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- Topic : Spatial Data & Statistics : Classes for Spatial Data [Filter]
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Registered: 2011-01-12 17:41 |
4. Nvidia thrust column-major matrices func - This package provides basic R functions made with a help of nvidia thrust for GPU computation in linux environment. The implementation is based on the NVIDIA CUDA Toolkit 4.0.
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- Development Status : 2 - Pre-Alpha [Filter]
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- Topic : High Performance Computing : Parallel Computing [Filter]
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Registered: 2011-06-10 12:13 |
5. Structural equation modeling - Several SEM related packages are developed for conducting structural equation modeling.
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- Topic : Multivariate Statistics : Latent Variable Approaches [Filter]
- Topic : Robust Statistics [Filter]
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Registered: 2011-09-26 14:13 |
6. Benchmarking genomic data integration - Comparison pipeline for multi-platform data integration algorithms for functional genomics studies. Provides tools to compare performance between publicly available implementations
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Registered: 2011-02-02 00:51 |
7. lefko3: matrix projection models - Project lefko3 is intended to provided utilities to estimate and analyze population matrix projection models (MPMs). Its focus is on the development of historical MPMs, including raw and function-based, but also develops normal, "ahistorical" MPMs, age-by-stage MPMs, and integral projection models (IPMs).
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Registered: 2021-07-15 19:48 |
8. toyRpkg - A toy R package demonstrating features of R packaging. Plus, some useful functions would be included.
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- Development Status : 1 - Planning [Filter]
- Development Status : 2 - Pre-Alpha [Filter]
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- Programming Language : Fortran [Filter]
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- Topic : Education [Filter]
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Registered: 2011-11-11 21:14 |
9. soRvi - avoimen datan työkalupakki - soRvi on avoimen datan työkalupakki, joka tarjoaa laskennallisia välineitä avointen rajapintojen kautta saatavien tietoaineistojen hakuun, siivoamiseen, yhdistelyyn, louhintaan ja visualisointiin tukien erityisesti suomalaista avoimen datan yhteisöä.
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- Programming Language : R [Filter]
- Topic : Database : R Interfaces [Filter]
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Registered: 2011-10-07 15:24 |
10. NDVI Time Series extraction and analysis - The routines extract automatically NDVI time series from different satellites (AVHRR, Spot Vegetation, MODIS) and provide tools to display and analyze them. Phenological metrics can be computed for every season as well as vegetation anomaly maps.
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- Development Status : 4 - Beta [Filter]
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- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2011-06-23 07:05 |
11. Patchwork - Allele-specific Copy-number analysis for whole-genome sequenced data in CompleteGenomics or BAM format.
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- Programming Language : Perl [Filter]
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- Topic : Bioinformatics : Visualization [Filter]
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Registered: 2011-10-31 13:53 |
12. Simulation of clustered multi-state data - R functions implementing the simulation procedure proposed at
http://www.slideshare.net/federicorotolo/a-copulabased-simulation-method-for-clustered-multistate-survival-data
to generate survival data with a clustered and multi-state structure.
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- License : Public Domain [Filter]
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- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Multivariate Statistics : Multivariate Distributions : Copulae [Filter]
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Registered: 2011-12-03 10:40 |
13. Parametric Frailty Models - Parametric Frailty Models, fitted by maximum marginal likelihood method.
Possible basline hazards: Weibull, Exponential, Gompertz, logNormal and loglogistic
Possible Frailty distributions: Gamma, Inverse Gaussian and Positive Stable
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- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Regression Models [Filter]
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Registered: 2011-10-28 16:21 |
14. Corbi - A collection of bioinformatics tools for general purposes such as network query, protein structure alignment, gene expression analysis.
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- Development Status : 4 - Beta [Filter]
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Registered: 2011-09-26 05:04 |
15. FactoMineR - FactoMineR performs multivariate EDA. It performs classical methods such as Principal Components Analysis (PCA), Correspondence analysis (CA), Multiple Correspondence Analysis (MCA) and more advanced methods like Multiple Factor Analysis (MFA).
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- Development Status : 6 - Mature [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Programming Language : R [Filter]
- Topic : Multivariate Statistics : Correspondence Analysis [Filter]
- Topic : Multivariate Statistics : Projection Methods : Principal Components [Filter]
- Topic : Multivariate Statistics : Unsupervised Classification : Cluster Analysis [Filter]
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Registered: 2010-06-23 08:23 |
16. IPMpack - IPMpack uses demographic vital rate data and (optionally) environmental data to build integral projection models. The package includes diagnostic routines, provides classic matrix model output, and produces post-hoc metrics (e.g., life expectancy).
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Registered: 2011-12-10 16:04 |
17. missMDA - Imputation of incomplete continuous or categorical datasets; Missing values are imputed with a principal component analysis (PCA) or a multiple correspondence analysis (MCA) model; Perform multiple imputation with and in PCA
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- Topic : Multivariate Statistics : Missing Data [Filter]
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Registered: 2010-07-28 13:20 |
18. SensoMineR - SensoMineR is dedicated to sensory data analysis. It tackles the following problems: characterizing products, assessing panel performances, relating sensory and instrumental data, mapping consumers’ preferences, napping data, categorizing products.
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Registered: 2010-06-24 10:02 |
19. TravelR (Travel Demand Modeling in R) - The TravelR project hosts tools for building travel demand models in R, including highway assignment with useful practical features such as multi-class equilibrium assignment, network turn penalties, select link analysis, and network skims.
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Registered: 2010-04-14 18:34 |
62 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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