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Topic :: Cluster Analysis [Remove This Filter]
18 projects in result set.
0. seurat - GUI for interactive and integrative analysis of omics data
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- Development Status : 3 - Alpha [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : Java [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Cluster Analysis (Now Filtering)
- Topic : Graphical User Interface [Filter]
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Registered: 2009-05-08 10:12 |
1. OOMPA - OOMPA is a suite of R packages for the analysis of gene expression (RNA), proteomics profiling , and other high throughput molecular biology data. OOMPA uses S4 classes to construct object-oriented tools with a consistent user interface.
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- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : Artistic License [Filter]
- Natural Language : English [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Cluster Analysis (Now Filtering)
- Topic : Multivariate Statistics [Filter]
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Registered: 2013-08-29 17:48 |
2. Cover tree for fast neighbor finding - Cover Trees for fast neighbor searching in metric spaces. A flexible interface for neighbor searching using any proximity function that is a metric.
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- Development Status : 2 - Pre-Alpha [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Chemoinformatics [Filter]
- Topic : Cluster Analysis (Now Filtering)
- Topic : Machine Learning [Filter]
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Registered: 2007-12-06 13:22 |
3. supraHex - supraHex devises a supra-hexagonal map, a giant hexagon on a 2D map grid consisting of smaller hexagons, for self-organising tabular omics data, carrying out gene clustering, sample correlation and multilayer omics data comparisons.
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- Development Status : 6 - Mature [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Cluster Analysis (Now Filtering)
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Registered: 2013-12-05 13:55 |
4. ggcluster - plot cluster data w/ ggplot2 - Tools for creating cluster plots, tree plots and dendrograms using ggplot.
ggcluster provides a convenient, generic extractor function that can handle dendrogram, tree, kmeans, hclust and Mclust objects.
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- Development Status : 3 - Alpha [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : R [Filter]
- Topic : Cluster Analysis (Now Filtering)
- Topic : Graphics : Plotting [Filter]
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Registered: 2011-07-13 08:40 |
5. EnQuireR - EnQuireR focuses on categorical variables and allows to automate the survey process. It includes univariate and multivariate data analyses and offers an easier view of the results by the automatic generation of a report and of a presentation via Sweave.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : R [Filter]
- Topic : Cluster Analysis (Now Filtering)
- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
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Registered: 2009-06-10 15:09 |
6. Biclustering Algorithm - Development of (bi)Clustering Algorithms for Clustering Samples Based on Gene Expression Data.
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- Development Status : 3 - Alpha [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : System Administrators [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows : Windows NT/2000/XP [Filter]
- Operating System : Microsoft : Windows : Windows Vista [Filter]
- Programming Language : R [Filter]
- Topic : Cluster Analysis (Now Filtering)
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Registered: 2009-02-28 12:21 |
7. R Commander Plugin for Fuzzy Clustering - Fuzzy Clustering plugin for Rcmdr. Method/algorithm that used : Fuzzy C-Means and Gustafson Kessel Clustering. Beside that two methods, this package provide cluster ensemble for fuzzy clustering and validation index.
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- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : System Administrators [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Programming Language : R [Filter]
- Topic : Cluster Analysis (Now Filtering)
- Topic : Multivariate Statistics : Unsupervised Classification : Cluster Analysis [Filter]
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Registered: 2016-05-02 05:23 |
8. RDataMining - a package for data mining - A comprehensive R Package for Data Mining, with contributions from many R users.
If you have developed or will implement any data mining algorithms in R, please participate in this project to make your work available to R users worldwide.
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- Development Status : 1 - Planning [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Cluster Analysis (Now Filtering)
- Topic : Machine Learning [Filter]
- Topic : Multivariate Statistics [Filter]
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Registered: 2012-06-06 05:19 |
9. kOO k-spatial co-occurrence analysis - The project aims at building an R package to implement and develop a published methodology analysing data from order k (k>=2) co-occurrences of events for spatial analysis of multivariate marked processes (point and areal).
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- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Programming Language : Other [Filter]
- Programming Language : R [Filter]
- Topic : Cluster Analysis (Now Filtering)
- Topic : Multivariate Statistics [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2012-06-08 08:56 |
10. SOMbrero - SOMbrero is an R package dedicated to online Self-Organizing Map. It can be used to train SOM for numeric datasets, contingency tables and dissimilarity data.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Cluster Analysis (Now Filtering)
- Topic : Multivariate Statistics : Projection Methods [Filter]
- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
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Registered: 2013-06-28 10:16 |
11. NeTomogRaphy - This project will be extended version of work done by Ula Karzelek at the Wrocław University of Technology as the Masters Thesis.
This is passive method which supports automatic overflow sources detection in local networks using R environment.
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- Development Status : 1 - Planning [Filter]
- Environment : Web Environment [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : PHP [Filter]
- Programming Language : R [Filter]
- Topic : Cluster Analysis (Now Filtering)
- Topic : Connectivity : Log Analysis [Filter]
- Topic : Other/Nonlisted Topic [Filter]
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Registered: 2008-12-10 19:42 |
12. Cytangle - Analyze single cell mass cytometry data
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : Artistic License [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Cluster Analysis (Now Filtering)
- Topic : Multivariate Statistics [Filter]
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Registered: 2016-10-26 12:51 |
13. RMacoqui - RMacoqui develops a probability procedure for the identification of chorotypes, i.e. distribution patterns shared by a group of species, which can be operatively identified within an area (Baroni-Urbani et al., 1978).
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- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : Spanish [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Cluster Analysis (Now Filtering)
- Topic : Spatial Data & Statistics [Filter]
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Registered: 2015-07-04 09:37 |
14. Yasomi: Self-Organising Map in R - Yasomi is Yet Another Self-Organising Map Implementation. It provides an implementation of Kohonen's SOM, with extension to kernel variants and comprehensive visualisation capabilities.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : French [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Cluster Analysis (Now Filtering)
- Topic : Machine Learning : Neural Networks [Filter]
- Topic : Multivariate Statistics : Unsupervised Classification [Filter]
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Registered: 2011-02-25 12:40 |
15. stream - data stream mining - A framework for data stream modeling and associated data mining tasks such as clustering and classification. Development of this package was supported in part by NSF IIS-0948893. Stream is now maintained on github at http://github.com/mhahsler/stream
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- Development Status : 4 - Beta [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Java [Filter]
- Programming Language : R [Filter]
- Topic : Cluster Analysis (Now Filtering)
- Topic : Machine Learning [Filter]
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Registered: 2010-09-22 17:14 |
16. blockmodeling - An R package for Generalized and classical blockmodeling of valued networks
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- Development Status : 3 - Alpha [Filter]
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Cluster Analysis (Now Filtering)
- Topic : Social Sciences [Filter]
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Registered: 2008-06-18 10:00 |
17. lshorth - Distribution diagnostics based on the lenght of the shorth, the shortest interval containing a specified fraction of the distribution. The diagnostics can be used to detect qualitative features, such as the modality or skewness of a distribution.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Cluster Analysis (Now Filtering)
- Topic : Graphics : Plotting [Filter]
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Registered: 2007-08-10 12:33 |
