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Topic :: Spatial Data & Statistics :: Ecological Analysis [Remove This Filter]
51 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. OUwie - Calculates and compares rate differences of continuous character evolution under Brownian motion and a new set of Ornstein-Uhlenbeck (OU) models that allow the strength of selection and drift to vary across selective regimes.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
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- Operating System : Microsoft : Windows [Filter]
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- Programming Language : R [Filter]
- Topic : Genetics : Phylogenetics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Activity Percentile: 0.00
Registered: 2011-07-13 13:38 |
1. NDVI Time Series extraction and analysis - The routines extract automatically NDVI time series from different satellites (AVHRR, Spot Vegetation, MODIS) and provide tools to display and analyze them. Phenological metrics can be computed for every season as well as vegetation anomaly maps.
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2011-06-23 07:05 |
2. Gradient forest - Detecting biological composition patterns along environmental gradients from site-by-species ecological data. Package gradientForest calculates the gradients from split-point importances provided by auxiliary package extendedForest, based on randomForest.
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- Development Status : 4 - Beta [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2011-01-06 08:05 |
3. vegan - Community Ecology Package - 'vegan' is a CRAN package for the analysis of ecological communities. It has tools for analysing ecological diversity, and for the multivariate analysis of communities (NMDS, pCCA, pRDA etc.) - Development on R-Forge discontinued, go to https://github.com/vegandevs/
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- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Environmetrics [Filter]
- Topic : Multivariate Statistics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2007-09-05 13:59 |
4. dcr - Data Cloning in R - Data cloning (DC) uses Bayesian MCMC to make maximum likelihood inference of complex hierarchical models. The bundle includes basic infrastructure for DC with parallel computing support, and more specialized packages for ecology.
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- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics [Filter]
- Topic : Optimization [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2009-08-17 16:25 |
5. sampSurf - Sampling surface simulation - This package will allow the estimation of sampling surfaces over a spatial extent for use in assessing different areal sampling methods used in forestry and ecology.
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- Development Status : 3 - Alpha [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2010-11-24 18:59 |
6. geospt - The 'geospt' package contains several geostatistical and radial basis functions, including prediction and cross validation. Besides, it includes functions for the design of optimal spatial sampling networks based on geostatistical modelling.
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- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Programming Language : R [Filter]
- Topic : Machine Learning : Genetic Algorithms [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
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Registered: 2012-06-04 18:39 |
7. Map Comparison Tools - This package provides different methods for raster map comparisons, and allows users to quantify differences between pairs of raster maps.
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- Development Status : 1 - Planning [Filter]
- Intended Audience : Developers [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2012-07-07 21:23 |
8. Spatial dynamic modeling - spdynamic is a framework to implement spatially-explicit dynamic simulation models. This package provides easy to use functions to organize scenarios of spatial dynamic simulations as well as read, visualize and access spatio-temporal data in the models.
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- Development Status : 1 - Planning [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Numerical Analysis [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2011-11-25 08:45 |
9. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions.
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Natural Language : German [Filter]
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- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
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- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2012-03-28 07:52 |
10. Uncertainty Analysis for SDMs - usdm is a framework to assess the impact of different sources of uncertainties (e.g. positional uncertainty) on performance of species distribution models (SDMs).
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
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Registered: 2012-09-17 00:05 |
11. SECR models in R using ADMB - The admbsecr package fits spatially explicit capture-recapture (SECR) models in which supplementary information on animal location is recorded by a passive detector. Parameter estimation is by maximum likelihood in ADMB.
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- Development Status : 2 - Pre-Alpha [Filter]
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- Natural Language : English [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2012-10-18 13:00 |
12. r2dRue - 2dRUE is a methodology to make a diagnostic of land condition in a large territory during a given time period. Was developed under the DeSurvey IP.
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- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Activity Percentile: 0.00
Registered: 2010-04-20 22:26 |
13. Functional diversity - The "Functional diversity" project is based on the FD package, which can compute different multidimensional FD indices. It also contains other useful tools for functional ecology, e.g. trait-based community assembly via maximum entropy models.
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- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
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- Topic : Multivariate Statistics : Matrix Manipulations [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2009-06-30 15:23 |
14. analogue - quantitative palaeoecology - analogue fits Modern Analogue Technique (MAT) and Weighted Averaging (WA) transfer function models for prediction of environmental data from species data.
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- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
- Topic : Time Series [Filter]
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Registered: 2007-09-07 13:38 |
15. to_be_removed - --
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- Development Status : 4 - Beta [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Graphical User Interface [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis (Now Filtering)
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Registered: 2010-08-09 10:48 |
16. mmSAR - mmSAR was a R package for the modelling of the Species-Area Relationship (SAR). It is now deprecated and has been replaced by the "sars" R package, available at https://cran.r-project.org/web/packages/sars/index.html
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Programming Language : R [Filter]
- Topic : Regression Models [Filter]
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Registered: 2009-08-25 12:11 |
17. Bioclim Variables - Bioclimatic envelope variables calculation. This intends to be useful for several researchers making use of niche modeling techniques. The packages here are provided to calculate the necessary input variables from monthly datasets.
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- Development Status : 3 - Alpha [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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Registered: 2009-12-29 01:44 |
18. Gap Analysis - Gap Analysis of ex-situ collections. Selection of sites where there's a demonstrated lack of agricultural biodiversity conservation.
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- Development Status : 3 - Alpha [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Programming Language : R [Filter]
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Registered: 2009-12-31 02:55 |
19. T-LoCoH - T-LoCoH is a method for constructing home ranges and exploring spatio-temporal patterns in movement data. Tailored for GPS data, it can produce maps of time use and behavior indices. General purpose functions including data cleaning and animations.
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
- Topic : Time Series [Filter]
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Activity Percentile: 0.00
Registered: 2013-03-12 23:47 |
51 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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