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174 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. STOPS - Methods that fit nonlinear distance transformations in multidimensional scaling and trade-off the fit with structure considerations to find optimal parameters. |
- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R [Filter]
- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Multivariate Statistics : Principal Coordinates / Scaling Methods [Filter]
- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
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Activity Percentile: 53.85
Registered: 2015-02-12 00:09 |
1. dnet - dnet is an open-source R package for integrative analysis of digitised data in terms of network, ontology and evolution, including: identification and visualisation of gene-active dynamic subnetworks; random walk with restart; and enrichment analysis |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
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- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Datasets [Filter]
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Registered: 2014-01-22 14:22 |
2. calibFit - This package provides curve fitting, visualization, and calibration methods for the development, validation, and use of biological and chemical assays. The functionality includes heteroscedasticity, model selection, and measures of assay quality. |
- Development Status : 6 - Mature [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
- Topic : Other/Nonlisted Topic [Filter]
- Topic : Regression Models [Filter]
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Registered: 2011-10-25 17:59 |
3. synbreed - Collection of statistical and genetic methods developed for the synbreed project for synergistic plant and animal breeding.
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- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Genetics [Filter]
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Registered: 2010-03-05 10:51 |
4. KDE & MDS - Helper functions for plotting KDEs and MDS maps of geochronology and geochemistry data, for visualisation of age distributions and sample comparison. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Other Audience [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : OS Independent [Filter]
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- Programming Language : R [Filter]
- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
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Registered: 2014-03-11 14:23 |
5. Request openblender.io API Services - Openblender.io is a platform that provides services such as blending open data, cleansing data and text vectorization, for mention some. This package looks forward to giving access to those services using R. Visit www.openblender.io for more information. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
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- Programming Language : R [Filter]
- Topic : Connectivity : WWW/HTTP [Filter]
- Topic : Datasets [Filter]
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Registered: 2020-06-22 17:08 |
6. greenbrown - greenbrown is a collection of functions to analyse trends, trend changes and phenology in gridded time series like from satellite observations or climate model simulations. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
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- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics [Filter]
- Topic : Time Series [Filter]
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Registered: 2013-02-27 17:37 |
7. grainscape - Create grains of connectivity and minimum planar graph models to calculate effective distances for landscape connectivity at multiple scales.
**Development of this package has moved to GitHub (https://achubaty.github.io/grainscape).** |
- Development Status : 4 - Beta [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2012-03-07 12:18 |
8. Eagle for Genome-Wide Association Mappin - The Eagle package is an implementation of multiple-locus association mapping on a genome-wide scale. It can handle inbred or outbred study populations, populations of arbitrary unknown complexity, and data larger than the memory capacity of the computer. |
- Development Status : 1 - Planning [Filter]
- Environment : Web Environment [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
- Topic : Genetics : QTL Mapping [Filter]
- Topic : High Performance Computing : Parallel Computing [Filter]
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Registered: 2017-07-24 00:36 |
9. Shrinkage Estimation - `shrink' is an R package for James-Stein-type shrinkage estimation of the parameters of a linear regression model. This is a work in progress jointly with S. Ejaz Ahmed (seahmed at uwindsor dot ca). |
- Development Status : 1 - Planning [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows : Windows Vista [Filter]
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- Programming Language : R [Filter]
- Programming Language : S/S Plus [Filter]
- Topic : Regression Models [Filter]
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Registered: 2010-09-04 03:45 |
10. Low Rank Gaussian Process Regression - Fit a Low Rank Gaussian Process Regression / Linear Mixed Model for large datasets. These models are widely used in statistical genetics as a test of association while correcting for the confounding effects of kinship and population structure. |
- Environment : Console (Text Based) [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics [Filter]
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Registered: 2013-12-19 15:12 |
11. Clustericat - This package performs clustering for categorical data-set by the conditional correlated mixture model. It contains a function clusteringcat() performing the clustering on categorical data-set and returns object of appropriate class. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : French [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
- Topic : Multivariate Statistics : Latent Variable Approaches [Filter]
- Topic : Multivariate Statistics : Unsupervised Classification : Cluster Analysis [Filter]
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Registered: 2013-12-05 14:22 |
12. CorReg - find a structure explaining correlations between covariates and use it to compute linear regression. It provides an efficient new estimator for recursive SEM. |
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Natural Language : English [Filter]
- Natural Language : French [Filter]
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- Operating System : Microsoft : Windows [Filter]
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Econometrics : Linear Regression Models [Filter]
- Topic : Regression Models [Filter]
- Topic : Robust Statistics [Filter]
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Registered: 2013-11-14 14:32 |
13. Meta-Analysis of Individual Differences - Functions for meta-analysis of individual differences. Intended for tests with dichotomous items and a Beta-binomial total score distribution. Beta-binomial parameters are estimated using moment estimation and integrated with bivariate meta-analysis. |
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
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- Programming Language : R [Filter]
- Topic : Education [Filter]
- Topic : Multivariate Statistics : Latent Variable Approaches [Filter]
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Registered: 2022-05-23 09:07 |
14. Composite Likelihood for Random Fields - Composite-Likelihood based methods for Random Fields. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Environmetrics [Filter]
- Topic : Multivariate Statistics : Multivariate Distributions [Filter]
- Topic : Spatial Data & Statistics [Filter]
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Registered: 2010-02-08 16:57 |
15. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : Perl [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
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Registered: 2013-11-21 21:46 |
16. R package for Non Smooth Optimization - An R package for non smooth optimization, with implementation of several algorithms including HANSO, SIDPSM etc. |
- Development Status : 3 - Alpha [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
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- Programming Language : R [Filter]
- Topic : Optimization [Filter]
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Registered: 2013-05-28 18:22 |
17. DHclus - Divisive hierarchical clustering algorithm with automatic determination of components |
- Development Status : 3 - Alpha [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : Spanish [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : R [Filter]
- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Cluster Analysis : Partitioning Clustering [Filter]
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Registered: 2012-08-31 12:26 |
18. netmes - Netmes is an R software package that allows assessing the Gene Regulatory Network Inference (GRNI) algorithms in detail by using several local and global network-based error measures in combination with an ensemble approach. |
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
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- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2013-07-26 14:26 |
19. ipoptr - an R interface to Ipopt - ipoptr provides an R interface to Ipopt (Interior Point OPTimizer), a software package to solve general nonlinear programming problems with nonlinear constraints and lower and upper bounds for the controls. |
- Development Status : 4 - Beta [Filter]
- License : Other/Proprietary License [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Optimization : Mathematical Programming : Nonlinear Programming [Filter]
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Activity Percentile: 0.00
Registered: 2010-08-23 20:33 |
174 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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