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36 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. ORCME - ORCME project develops a package for order restricted clustering of microarray experiments. It reflects on-going research of the bioinformatics group within the Center for Statistics at UHasselt. | |
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Activity Percentile: 0.00 Registered: 2008-08-21 11:49 |
1. synbreed - Collection of statistical and genetic methods developed for the synbreed project for synergistic plant and animal breeding.
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Activity Percentile: 0.00 Registered: 2010-03-05 10:51 |
2. ddepn - DDEPN (Dynamic Deterministic Effects Propagation Networks): Infer signalling networks for high-throughput genomic or proteomic timecourse data, generated after external perturbation like activation or inhibition of network nodes. | |
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Activity Percentile: 0.00 Registered: 2011-06-10 12:24 |
3. smoothtest - This package implements a whole series of smooth tests that serve as goodness of fit tests for univariate data against a whole range of distributions. The tests can be performed both parametric and data driven. | |
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Activity Percentile: 0.00 Registered: 2011-11-29 13:02 |
4. waveTiling - Perform transcriptome analysis from tiling array data by a wavelet-based functional model. | |
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Activity Percentile: 0.00 Registered: 2011-12-05 20:42 |
5. Quantitative Fitness Analysis - QFA is an experimental and computational methodology for estimation of the fitnesses of arrayed microbial cultures growing on solid agar. Methods for estimating fitnesses, fitness variability and genetic interaction strengths are included. | |
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Activity Percentile: 0.00 Registered: 2010-09-06 17:05 |
6. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model. | |
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Activity Percentile: 0.00 Registered: 2012-07-03 03:50 |
7. cRacker - cRacker automates standard normalization strategies of quantitative proteomic experiments. It simplifies the analysis of quantified peptide lists coming from various proteomic quantitation softwares. | |
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Activity Percentile: 0.00 Registered: 2012-07-12 22:01 |
8. The forensim package - The forensim package for the R environment provides statistical tools dedicated to the interpretation of forensic DNA mixtures | |
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Activity Percentile: 0.00 Registered: 2009-04-17 15:10 |
9. Range Correlations - Methods from spatial statistics are adapted and implemented to be used for assessing marginal and partial correlations in range and site data (positional data) along genomes based on the Bioconductor package GenomicRanges. | |
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Activity Percentile: 0.00 Registered: 2011-03-07 18:54 |
10. Layered and chained mixture models - Layered and chained mixture models for various univariate and multivariate distributions. | |
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Activity Percentile: 0.00 Registered: 2011-05-10 07:45 |
11. qPCR - qPCR is a method for detecting and quantifying mRNA from a given sample. This project attempts to solve 3 main problems in analysis of qPCR data
Unification of different output formats
Quality Control to find problematic reactions
Normalisation of data | |
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Activity Percentile: 0.00 Registered: 2008-10-09 17:22 |
12. GeneticMediation - GeneticMediation provides methods for conducting causal mediation analysis on data from the ROSMAP study. It also provides methods for cleaning, matching, and preparing the data for analysis. | |
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Activity Percentile: 0.00 Registered: 2020-04-25 19:28 |
13. msap - The package msap provides a easy way to analyse MSAP (Methylation-Sensible Amplified Polymorphism) data in order to asses epigenetic and genetic differences between groups of samples. | |
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Registered: 2012-06-13 23:35 |
14. therese - The purpose of this package is to propose a method for inferring networks from expression data obtained in various experimental condition. The "cLasso" (consensus Lasso) method is implemented. | |
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Activity Percentile: 0.00 Registered: 2013-07-05 08:44 |
15. cvrcalc - A Cardiovascular Risk's Calculator by Scores | |
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Activity Percentile: 0.00 Registered: 2013-08-02 12:18 |
16. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486. | |
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Activity Percentile: 0.00 Registered: 2013-11-21 21:46 |
17. CENTIPEDE - CENTIPEDE is a probabilistic framework that integrates tissue-specific experimental data such as histone modifications and DNaseI cleavage patterns with genomic information such as gene annotation and evolutionary
conservation. | |
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Activity Percentile: 0.00 Registered: 2010-10-26 14:24 |
18. GADA - GADA is an R package for fast and accurate method for detecting copy number alterations (CNA) from array data.
http://groups.google.com/group/gadaproject | |
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Activity Percentile: 0.00 Registered: 2010-10-09 02:03 |
19. modEvA - modEvA is an R package for species distribution model evaluation and analysis. | |
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Activity Percentile: 0.00 Registered: 2014-04-04 11:51 |
36 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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