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33 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. RHRV - Package for carrying out heart rate variability studies of ECG records |
- Development Status : 6 - Mature [Filter]
- Intended Audience : Developers (Now Filtering)
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
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- Programming Language : R [Filter]
- Topic : Bioinformatics (Now Filtering)
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Activity Percentile: 94.12
Registered: 2010-10-14 10:22 |
1. SeqinR: Biological Sequences in R - The seqinR package for the R environment contains utilities to retrieve and analyse biological sequences. |
- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : French [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics (Now Filtering)
- Topic : Database : R Interfaces [Filter]
- Topic : Genetics [Filter]
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Activity Percentile: 0.00
Registered: 2008-07-28 09:03 |
2. Genotype Database Framework - GT.DB is a database framework for efficiently managing genome-wide genotype datasets (i.e. 10^6 or more biallelic markers, 1000s of samples), as well as underlying raw data and complex phenotype data, tightly integrated with R libraries for analysis. |
- Development Status : 4 - Beta [Filter]
- Environment : Other Environment [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
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- Programming Language : Other [Filter]
- Programming Language : R [Filter]
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Registered: 2009-09-17 00:13 |
3. COXMEG - COXMEG provides a tool to fit a Cox mixed-effects model, incorporating fast algorithms for genome-wide association analysis. |
- Development Status : 3 - Alpha [Filter]
- Intended Audience : Developers (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
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- Programming Language : R [Filter]
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Registered: 2019-08-02 18:19 |
4. CoreArray - The package provides a high-level R interface to CoreArray Genomic Data Structure (GDS) data files, which are portable across platforms and include hierarchical structure to store multiple scalable array-oriented data sets with metadata information. |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers (Now Filtering)
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
- Operating System : OS Independent [Filter]
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Activity Percentile: 0.00
Registered: 2014-05-31 04:36 |
5. Animal Intake Behaviour Analysis Package - POO R package for chronological Intake Behaviour Data analysis from test animals. Manage data and predict normal and irregular behaviour. |
- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers (Now Filtering)
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : Spanish [Filter]
- Operating System : OS Independent [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics (Now Filtering)
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Time Series [Filter]
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Activity Percentile: 0.00
Registered: 2010-08-30 08:56 |
6. missForest - The missForest package enables the user to perform straightforward missing value imputation on basically any kind of data. Additionally, the algorithm supplies the user with an out-of-bag imputation error estimate. |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers (Now Filtering)
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics (Now Filtering)
- Topic : Machine Learning : Random Forests [Filter]
- Topic : Multivariate Statistics : Missing Data [Filter]
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Activity Percentile: 0.00
Registered: 2011-05-18 08:28 |
7. simecol - Ecological Models with R - simecol allows to implement ecological models (ODEs, IBMs, ...) using a template-like object-oriented stucture. It helps to organize scenarios and may also be useful for other areas. |
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
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- Programming Language : Tcl [Filter]
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- Topic : Software Development [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Activity Percentile: 0.00
Registered: 2008-02-20 20:34 |
8. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : German [Filter]
- Operating System : MacOS [Filter]
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Activity Percentile: 0.00
Registered: 2013-05-29 18:34 |
9. NMF - Nonnegative Matrix Factorization - This package provides a flexible framework to perform Non-negative Matrix Factorization (NMF).
It implements a set of already published algorithms and seeding methods, and provides a framework
to test, develop and plug new/custom algorithms. |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers (Now Filtering)
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics (Now Filtering)
- Topic : Multivariate Statistics : Projection Methods : Independent Components [Filter]
- Topic : Optimization [Filter]
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Activity Percentile: 0.00
Registered: 2010-01-07 14:13 |
10. dcGOR - dcGOR is a package for analysing domain-centric ontologies and annotations. It includes: enrichment analysis and visualisation; construction of a domain (semantic similarity) network; significance analysis for a contact network. |
- Development Status : 6 - Mature [Filter]
- Intended Audience : Developers (Now Filtering)
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
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- Programming Language : R [Filter]
- Topic : Bioinformatics (Now Filtering)
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Registered: 2014-10-23 15:21 |
11. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
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- Topic : Machine Learning [Filter]
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Activity Percentile: 0.00
Registered: 2012-08-10 08:48 |
12. netbenchmark - The development version of netbenchmark package, which implements a benchmarking of several gene network inference algorithms from gene expression data. |
- Development Status : 4 - Beta [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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Activity Percentile: 0.00
Registered: 2014-11-28 09:55 |
13. aroma.* packages [MOVED TO GITHUB] - This repository and all of its packages have been moved to https://github.com/HenrikBengtsson/ |
- Development Status : 3 - Alpha [Filter]
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : No Input/Output (Daemon) [Filter]
- Environment : Web Environment [Filter]
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- License : Other/Proprietary License [Filter]
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Activity Percentile: 0.00
Registered: 2009-05-19 20:01 |
14. MELON - Methylation Enriched LOci Normalization for genome-wide DNA methylation experiments |
- Development Status : 3 - Alpha [Filter]
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- Programming Language : R [Filter]
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- Topic : Biostatistics & Medical Statistics [Filter]
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Activity Percentile: 0.00
Registered: 2012-04-18 14:21 |
15. Parent-specific DNA copy numbers (abo) - Paired PSCBS: Parent-specific copy number in paired tumor-normal studies using circular binary segmentation (CBS).
Packages in this project: PSCBS. |
- Development Status : 3 - Alpha [Filter]
- Development Status : 4 - Beta [Filter]
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- Programming Language : R [Filter]
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Activity Percentile: 0.00
Registered: 2009-10-20 01:21 |
16. mzmatch.R - This package provides integration between the mzMatch/PeakML Java library (and its file formats) and the XCMS library for R. mzMatch is a modular, open source and platform independent data processing pipeline for metabolomics LC/MS data. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Natural Language : Russian [Filter]
- Operating System : Microsoft : Windows : Windows Vista [Filter]
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- Programming Language : Java [Filter]
- Programming Language : R [Filter]
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- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
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Activity Percentile: 0.00
Registered: 2010-10-20 17:09 |
17. Corbi - A collection of bioinformatics tools for general purposes such as network query, protein structure alignment, gene expression analysis. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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Activity Percentile: 0.00
Registered: 2011-09-26 05:04 |
18. Rigorous Analytics - Software for the quantitative analysis of medical imaging data. Medical imaging data formats include DICOM, AFNI, ANALYZE and NIfTI. |
- Development Status : 3 - Alpha [Filter]
- Development Status : 4 - Beta [Filter]
- Intended Audience : Developers (Now Filtering)
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- License : OSI Approved : BSD License [Filter]
- Natural Language : English [Filter]
- Operating System : POSIX : Linux [Filter]
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- Programming Language : R [Filter]
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Activity Percentile: 0.00
Registered: 2010-01-18 10:18 |
19. RNetLogo (Discontinued) - RNetLogo is an interface to the agent-based modelling plattform NetLogo. NL can be embedded into the R environment with headless (no GUI) and interactive GUI mode. It provides functions to load models, execute commands and to get values from reporters. |
- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Operating System : Microsoft : Windows [Filter]
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- Programming Language : Java [Filter]
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- Topic : Social Sciences [Filter]
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Activity Percentile: 0.00
Registered: 2011-08-19 15:59 |
33 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>