Software Map
Project Tree
Now limiting view to projects in the following categories:
Intended Audience :: End Users/Desktop [Remove This Filter]
Natural Language :: English [Remove This Filter]
Operating System :: OS Independent [Remove This Filter]
Environment :: Console (Text Based) [Remove This Filter]
License :: OSI Approved :: GNU General Public License (GPL) [Remove This Filter]
66 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. Learn user preferences - Active machine learning methods are used to guess user intent in interactive R sessions, leading to more sensible, user-specific defaults for various functions.
|
- Development Status : 1 - Planning [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Machine Learning [Filter]
|
Registered: 2010-11-26 16:34 |
1. renjin - Renjin is ongoing project to implement a new interpreter for the R language that runs within the Java Virtual Machine, and specifically on the Google AppEngine platform
|
- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Environment : Web Environment [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- Intended Audience : System Administrators [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : Java [Filter]
- Topic : Software Development : Interpreters [Filter]
|
Activity Percentile: 0.00
Registered: 2010-12-14 19:46 |
2. dcr - Data Cloning in R - Data cloning (DC) uses Bayesian MCMC to make maximum likelihood inference of complex hierarchical models. The bundle includes basic infrastructure for DC with parallel computing support, and more specialized packages for ecology.
|
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bayesian Statistics [Filter]
- Topic : Optimization [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2009-08-17 16:25 |
3. partykit: Recursive Partytioning Toolkit - Infrastructure for representing, summarizing, and visualizing tree-structured models. It can be used for constructing or reading tree models from different sources (rpart, RWeka, PMML), sharing
functionality for print/plot/predict methods.
|
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Machine Learning : Recursive Partitioning [Filter]
- Topic : Regression Models [Filter]
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2008-09-30 11:39 |
4. Global Soil Information Facilities - Global Soil Information Facilities is an initiative of the ISRIC — World Soil Information Institute and Africa Soil Information Service (africasoils.net) team.
|
- Development Status : 1 - Planning [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : Python [Filter]
- Programming Language : R [Filter]
- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-06-12 20:12 |
5. phrapl - Note: development of phrapl has moved to GitHub: https://github.com/bomeara/phrapl
|
- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Genetics : Phylogenetics [Filter]
- Topic : Genetics : Population Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-06-14 14:51 |
6. MeDiChI - R package implementing model based deconvolution of ChIP-chip (transcription factor binding) data, as published in Bioinformatics journal.
Please visit http://baliga.systemsbiology.net/medichi for source code, instructions, and R package downloads.
|
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Machine Learning : Regularized and Shrinkage Methods [Filter]
|
Registered: 2010-05-14 17:13 |
7. Bias reduction in GLMs - brglm provides brglm.fit which is an alternative method to glm.fit that works under the usual glm interface.
Estimation is either by correcting the bias of the maximum likelihood estimates or using an adjusted-score approach to improving bias.
|
- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Regression Models [Filter]
- Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
|
Activity Percentile: 0.00
Registered: 2011-08-20 14:19 |
8. linprog: Linear Programming/Optimization - This package can be used to solve Linear Programming / Linear optimization problems by using the simplex algorithm.
|
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
|
Activity Percentile: 0.00
Registered: 2009-12-25 16:29 |
9. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties.
|
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-10-11 08:51 |
10. semtools: Methods for SEMs - semtools - Methods for Diagnostic Testing of Structural Equation Models
|
- Development Status : 1 - Planning [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Multivariate Statistics [Filter]
- Topic : Regression Models [Filter]
- Topic : Social Sciences [Filter]
|
Activity Percentile: 0.00
Registered: 2010-09-21 22:15 |
11. Functional diversity - The "Functional diversity" project is based on the FD package, which can compute different multidimensional FD indices. It also contains other useful tools for functional ecology, e.g. trait-based community assembly via maximum entropy models.
|
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Multivariate Statistics : Matrix Manipulations [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2009-06-30 15:23 |
12. Early Warning Signals Toolbox - The Early-Warning-Signals Toolbox provides to the general practitioner available methods for estimating statistical changes in timeseries that can be used for the in-time identification of critical transitions.
|
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Environmetrics [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2011-12-20 21:58 |
13. PwrGSD - Tools for the design and analysis of sequentially monitored trials on a time to event endpoint. Allows for time varying hazards, allows a flexible specification of contamination and non-compliance.
|
- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
|
Activity Percentile: 0.00
Registered: 2010-03-13 16:17 |
14. Corbi - A collection of bioinformatics tools for general purposes such as network query, protein structure alignment, gene expression analysis.
|
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-09-26 05:04 |
15. changepoints: Changepoint Analysis Tools - Unified infrastracture for changepoint analysis for different types of parametric models employing different segmentation strategies (binary, recursive binary, dynamic programming, PELT, etc.)
|
- Development Status : 1 - Planning [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Econometrics : Structural Change [Filter]
- Topic : Finance : Time Series [Filter]
- Topic : Optimization [Filter]
|
Activity Percentile: 0.00
Registered: 2012-03-27 21:23 |
16. Markov decision processes (MDPs) in R - Create and optimize MDPs with discrete time steps and state space. Both normal MDPs and hierarchical MDPs can be considered.
|
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Optimization [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2009-06-08 12:06 |
17. Breaks For Additive Season and Trend - BFAST, Breaks For Additive Season and Trend, integrates the decomposition of time series into trend, season, and remainder components with methods for detecting and characterizing change within time series.
|
- Development Status : 2 - Pre-Alpha [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : R [Filter]
- Topic : Econometrics : Structural Change [Filter]
- Topic : Econometrics : Time Series Modelling [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2009-09-14 03:28 |
18. Activated Region Fitting - Activated Region Fitting (ARF) is a program for functional Magnetic Resonance Imaging (fMRI) data analysis. ARF uses Gaussian shape spatial models to parameterize active brain regions.
|
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2008-09-18 11:23 |
19. AMOREJ / AMORE++ - Java and C++ AMORE package using an object oriented approach.
|
- Development Status : 2 - Pre-Alpha [Filter]
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Natural Language : Spanish [Filter]
- Operating System : OS Independent (Now Filtering)
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Java [Filter]
- Programming Language : R [Filter]
- Topic : Machine Learning : Neural Networks [Filter]
|
Activity Percentile: 0.00
Registered: 2011-05-13 21:05 |
66 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
