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8 projects in result set.
0. RMesquite - RMesquite establishes interoperability between Mesquite (http://mesquiteproject.org) and R. It exposes Mesquite methods transparently as R functions that consume and provide native R data types, and converts seamlessly between Java and R data types. |
- Development Status : 3 - Alpha [Filter]
- Intended Audience : Developers (Now Filtering)
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : Java [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Genetics : Phylogenetics (Now Filtering)
- Topic : Multivariate Statistics [Filter]
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Registered: 2008-07-17 03:57 |
1. SPecies' LImits by Threshold Statistics - splits contains tools for delimiting species and automated taxonomy at many levels of biological organization (eg. DNA barcoding, morphometrics), top-down (merging phylogenetic and phylogeographic methods) and bottom-up (single samples into >1 groups). |
- Development Status : 3 - Alpha [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Programming Language : R [Filter]
- Topic : Cluster Analysis : Other Cluster Algorithms [Filter]
- Topic : Genetics : Phylogenetics (Now Filtering)
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Registered: 2009-01-15 14:06 |
2. adephylo - The package 'adephylo' implements multivariate approaches for comparative data, i.e. data including one phylogeny and one or several traits. |
- Development Status : 4 - Beta [Filter]
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Genetics : Phylogenetics (Now Filtering)
- Topic : Multivariate Statistics : Projection Methods [Filter]
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Registered: 2008-11-18 15:35 |
3. phrapl - Note: development of phrapl has moved to GitHub: https://github.com/bomeara/phrapl |
- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) [Filter]
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- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
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- Programming Language : R [Filter]
- Topic : Genetics : Phylogenetics (Now Filtering)
- Topic : Genetics : Population Genetics [Filter]
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Registered: 2011-06-14 14:51 |
4. Analysis of Independent Contrasts - The CAIC package provides methods for the comparative analysis of taxa using independent contrasts methods. It reimplements the methods of the CAIC and MacroCAIC programs will implement alternative methods such as those provided in LDAP. |
- Development Status : 3 - Alpha [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Genetics : Phylogenetics (Now Filtering)
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Registered: 2008-01-31 15:29 |
5. phylobase - Defining the basic S4 classes and methods for representing and manipulating phylogenetic trees and data in R. |
- Development Status : 4 - Beta [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Programming Language : R [Filter]
- Topic : Genetics : Phylogenetics (Now Filtering)
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Registered: 2007-12-14 19:17 |
6. Phylobase Extension - This package provides classes and methods which help read/write/manipulate branch-annotated phylogenetic trees (SIMMAP-format) and supports for a few other extra phylogenetic tree features (like tree weight).
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- Development Status : 3 - Alpha [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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Registered: 2011-04-26 02:20 |
7. OMearaLab - This project hosts scripts being developed by the O'Meara lab ( http://www.brianomeara.info ), typically for use in comparative methods. This is primarily an incubator for things in a raw state (before becoming projects of their own) or one-off scripts. |
- Development Status : 2 - Pre-Alpha [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : R [Filter]
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Registered: 2011-01-12 20:42 |