Software Map
Project Tree
Now limiting view to projects in the following categories:
Programming Language :: R [Remove This Filter]
Topic :: Biostatistics & Medical Statistics [Remove This Filter]
Development Status :: 4 - Beta [Remove This Filter]
27 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. gsDesign: Group Sequential Design - Generates group sequential designs using alpha- and beta-spending functions or Wang-Tsiatis (e.g., O'Brien-Fleming and Pocock) boundary families. Many plotting capabilities as well as non-binding futility rules are available. Easily extended. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2008-08-31 13:07 |
1. hyperSpec - hyperSpec is a R package to handle hyperspectral data, i.e. spectra plus further information such as spatial location, time, concentrations, etc.
Such data are frequently encountered in Raman, IR, NIR, UV/VIS, NMR, mass spectroscopy, AAS / AES, ... |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Chemoinformatics [Filter]
|
Activity Percentile: 0.00
Registered: 2009-02-23 09:27 |
2. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : Perl [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2013-11-21 21:46 |
3. twKinresp - Fitting kinetic models to microbial respiration data.
April 2019: Package twKinresp has been moved to github:
https://github.com/bgctw/twKinresp
April 2018: Package twNlme has been moved to github:
https://github.com/bgctw/twNlme/
The package versions here are kept for history, but are outdated.
|
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Environmetrics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-09-15 16:23 |
4. lethal - Compute lethal doses for count data based on generalized additive models (GAMs) together with parametric bootstrap confidence intervals for the lethal dose.
For a current development version see https://github.com/hofnerb/lethal |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
- Topic : Regression Models [Filter]
|
Registered: 2014-02-28 13:11 |
5. Meta-Analysis of Diagnostic Accuracy - The mada package (Meta-Analysis of Diagnostic Accuracy) provides model fitting functions for diagnostic accuracy data. This includes the bivariate model of Reitsma et al. (2005) which is equivalent to the HSROC by Rutter&Gatsonis (2001). |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Social Sciences [Filter]
|
Activity Percentile: 0.00
Registered: 2012-01-25 11:07 |
6. FFD - Freedom From Disease - The project provides tools for two-stage surveys to substantiate freedom from disease using imperfect diagnostic tests. Risk based sampling and a graphical user interface (GUI) are implemented. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2010-07-15 14:07 |
7. TopKLists - The package includes tools for inference, aggregation, and visualization of multiple ranked lists. Consolidated information from two or more such lists comprising the same set of objects can be obtained. Incomplete rankings and partial lists are allowed. |
- Development Status : 4 - Beta (Now Filtering)
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : End Users/Desktop [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Marketing & Business Analytics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-05-06 10:59 |
8. DICOM: Import DICOM data via R - The DICOM package is a small collection of R functions to import binary data files (e.g., MRI, CT, PET, etc.) that conform to the DICOM Data Standard. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Other/Nonlisted Topic [Filter]
|
Registered: 2009-05-29 21:29 |
9. Animal - The Animal package is intended as tool for analyzing time coded behavioral observation and other ethological data. The project aims to promote the use of R in the the animal sciences and to provide easy to use functions for the researches in the field. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Finance : Data and Date Management [Filter]
|
Activity Percentile: 0.00
Registered: 2009-03-25 08:04 |
10. CRImage - CRImage is a package to process and analyze biological images. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2010-06-27 11:26 |
11. HTSanalyzeR - HTSanalyzeR provides state-of-the-art analysis methods of pathway and network enrichment for High-Throughput Screens in a unified framework and provides easy-to-understand HTML output |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2010-06-28 19:28 |
12. HaarSeg [MOVED TO GITHUB] - This repository and its package has been moved to <https://github.com/HenrikBengtsson/HaarSeg> |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2009-06-05 00:29 |
13. GWASBinTests - Bin-based analysis of genome-wide association studies
Given an a priori partitioning of the genome into regions termed bins, GWASBinTests can compute
p-values (and FDRs) of several association tests. |
- Development Status : 4 - Beta (Now Filtering)
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Natural Language : French [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Medical Science [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2011-10-07 17:59 |
14. Nonparametrics for Clustered Binary Data - CorrBin implements nonparametric methods for analysing exchangeable binary and multinomial data with variable cluster sizes with emphasis on trend testing. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2008-10-02 19:05 |
15. immunoassay - The purpose of this project is to allow fine-tuning of sigmoidal models beyond the limits of instrument software; and to provide functions for batch processing of output files and creation of reports with nice graphics. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Medical Science [Filter]
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Regression Models [Filter]
|
Activity Percentile: 0.00
Registered: 2011-03-17 12:58 |
16. blupsurv - Tools for fitting proportional hazards models to clustered
recurrent events data. Nested frailties are modeled by their
best linear unbiased predictors under an auxiliary Poisson model.
Univariate and bivariate recurrent events processes are permitted. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Multivariate Statistics [Filter]
- Topic : Regression Models [Filter]
|
Activity Percentile: 0.00
Registered: 2008-06-14 13:52 |
17. Intaclass Correlation Coefficient - The package provides functions to assist in the estimation of the Intraclass Correlation Coefficient (ICC) under different experimental designs. The goal is to provide tools when making parameter estimates of the ICC. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : Public Domain [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2011-02-02 05:33 |
18. qualV - Qualitative Validation Criteria - Package qualV provides quantitative and qualitative criteria to compare models with data and to measure similarity of patterns. Specific attention is payed to problems with systematic differences and time shifts. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2008-02-28 15:45 |
19. DiagnosisMed - DiagnosisMed is a package to analyze data from diagnostic test accuracy research evaluating health conditions. |
- Development Status : 1 - Planning [Filter]
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2008-09-19 23:16 |
27 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>