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Intended Audience :: End Users/Desktop [Remove This Filter]
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39 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. cvrcalc - A Cardiovascular Risk's Calculator by Scores | |
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Activity Percentile: 0.00 Registered: 2013-08-02 12:18 |
1. CENTIPEDE - CENTIPEDE is a probabilistic framework that integrates tissue-specific experimental data such as histone modifications and DNaseI cleavage patterns with genomic information such as gene annotation and evolutionary
conservation. | |
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Activity Percentile: 0.00 Registered: 2010-10-26 14:24 |
2. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486. | |
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Activity Percentile: 0.00 Registered: 2013-11-21 21:46 |
3. GADA - GADA is an R package for fast and accurate method for detecting copy number alterations (CNA) from array data.
http://groups.google.com/group/gadaproject | |
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Activity Percentile: 0.00 Registered: 2010-10-09 02:03 |
4. HaarSeg [MOVED TO GITHUB] - This repository and its package has been moved to <https://github.com/HenrikBengtsson/HaarSeg> | |
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Activity Percentile: 0.00 Registered: 2009-06-05 00:29 |
5. modEvA - modEvA is an R package for species distribution model evaluation and analysis. | |
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Activity Percentile: 0.00 Registered: 2014-04-04 11:51 |
6. pi0 estimators - Estimation of the proportion of true null hypotheses (pi0) from a large number of hypothesis tests; Non/parametric recovery of noncentrality parameter distribution; False discovary rates (FDR) computation. | |
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Activity Percentile: 0.00 Registered: 2010-03-21 02:01 |
7. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor. | |
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Activity Percentile: 0.00 Registered: 2010-04-01 17:54 |
8. GenABEL - A suite of packages for statistical genomics | |
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Registered: 2009-08-12 17:07 |
9. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model. | |
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Activity Percentile: 0.00 Registered: 2012-07-03 03:50 |
10. sonicLength - sonicLength estimates the abundances of cells marked with integrated DNA using DNA fragment length data. Also included are tools for random number generation apropos to fragment lengths, simulating datasets, and jackknifing multiple replicates | |
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Activity Percentile: 0.00 Registered: 2011-09-14 03:27 |
11. synbreed - Collection of statistical and genetic methods developed for the synbreed project for synergistic plant and animal breeding.
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Activity Percentile: 0.00 Registered: 2010-03-05 10:51 |
12. cRacker - cRacker automates standard normalization strategies of quantitative proteomic experiments. It simplifies the analysis of quantified peptide lists coming from various proteomic quantitation softwares. | |
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Activity Percentile: 0.00 Registered: 2012-07-12 22:01 |
13. The forensim package - The forensim package for the R environment provides statistical tools dedicated to the interpretation of forensic DNA mixtures | |
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Activity Percentile: 0.00 Registered: 2009-04-17 15:10 |
14. GWASBinTests - Bin-based analysis of genome-wide association studies
Given an a priori partitioning of the genome into regions termed bins, GWASBinTests can compute
p-values (and FDRs) of several association tests. | |
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Activity Percentile: 0.00 Registered: 2011-10-07 17:59 |
15. EBI Metagenomics - An R package for working with data from the EBI Metagenomics Portal: https://www.ebi.ac.uk/metagenomics/ | |
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Activity Percentile: 0.00 Registered: 2016-10-08 19:20 |
16. Range Correlations - Methods from spatial statistics are adapted and implemented to be used for assessing marginal and partial correlations in range and site data (positional data) along genomes based on the Bioconductor package GenomicRanges. | |
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Activity Percentile: 0.00 Registered: 2011-03-07 18:54 |
17. Quantitative Fitness Analysis - QFA is an experimental and computational methodology for estimation of the fitnesses of arrayed microbial cultures growing on solid agar. Methods for estimating fitnesses, fitness variability and genetic interaction strengths are included. | |
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Activity Percentile: 0.00 Registered: 2010-09-06 17:05 |
18. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties. | |
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Activity Percentile: 0.00 Registered: 2011-10-11 08:51 |
19. ddepn - DDEPN (Dynamic Deterministic Effects Propagation Networks): Infer signalling networks for high-throughput genomic or proteomic timecourse data, generated after external perturbation like activation or inhibition of network nodes. | |
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Activity Percentile: 0.00 Registered: 2011-06-10 12:24 |
39 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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