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151 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Rigorous Analytics - Software for the quantitative analysis of medical imaging data. Medical imaging data formats include DICOM, AFNI, ANALYZE and NIfTI.
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- Development Status : 3 - Alpha [Filter]
- Development Status : 4 - Beta [Filter]
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Registered: 2010-01-18 10:18 |
1. Genome-wide analysis using MOSS - Performs genome-wide analysis of dense SNP array data using the mode oriented stochastic search (MOSS) algorithm in a case-control design. Includes preprocessing of the data from Plink format to the format required by the MOSS algorithm.
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- Development Status : 3 - Alpha [Filter]
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- Topic : Bayesian Statistics [Filter]
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- Topic : Graphical Models [Filter]
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Registered: 2011-01-07 17:53 |
2. parallelstructure - Package to provide a R framework to make use of multi-core computers when running analysis in the population genetics software STRUCTURE.
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- Development Status : 4 - Beta [Filter]
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- Topic : Genetics : Population Genetics [Filter]
- Topic : High Performance Computing : Parallel Computing [Filter]
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Registered: 2013-03-26 16:28 |
3. Animal Intake Behaviour Analysis Package - POO R package for chronological Intake Behaviour Data analysis from test animals. Manage data and predict normal and irregular behaviour.
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Registered: 2010-08-30 08:56 |
4. SpatialExtremes - The SpatialExtremes package aims to develop tools for the modeling of spatial extremes. The knowledge of the univariate/multivariate distribution of extremes is not enough. This package will try to fill this gap.
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- Topic : Multivariate Statistics : Latent Variable Approaches [Filter]
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- Topic : Spatial Data & Statistics [Filter]
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Registered: 2008-10-04 11:03 |
5. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition.
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- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
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Registered: 2013-01-21 21:13 |
6. qsaR in R - This project aims at building a flexible framework for working with QSAR in R.
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Registered: 2012-10-22 23:24 |
7. synchrony - Tools for computing spatial, temporal, and spatiotemporal statistics
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Registered: 2012-04-17 15:53 |
8. SPRINT: Simple Parallel R INTerface - SPRINT is a Simple Parallel R INTerface to High Performance Computing (HPC) that enables biologists to run statistical analysis scripts using R in parallel on HPC clusters. It consists of an HPC harness and a library of parallelized R functions.
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- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2009-11-20 16:56 |
9. cran2deb - debianize CRAN - cran2deb automatically converts CRAN packages for R into Debian packages, handling dependency matching and package updates nicely.
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- Development Status : 4 - Beta [Filter]
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Registered: 2008-09-11 19:33 |
10. modis - Functions for download, mosaic, re-sample, re-project, analyse and visualise of MODIS grid data. Special attention is given to spatio-temporal change detection and phenological metric extraction.
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- Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]
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Registered: 2011-11-02 22:53 |
11. SQL-based analysis for large surveys - Analysing large complex surveys, such as the American Community Survey, using R to generate SQL code for MonetDB.
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- Development Status : 3 - Alpha [Filter]
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- Programming Language : PL/SQL [Filter]
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- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Database : R Interfaces [Filter]
- Topic : Social Sciences [Filter]
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Registered: 2012-09-18 04:53 |
12. Physical activity with accelerometers - The package pawacc collects functions to read, process and store accelerometer files. Models supported: Actigraph GT1M, GT3X and ActiSleep.
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- Development Status : 4 - Beta [Filter]
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Registered: 2012-09-03 15:45 |
13. Hierarchical Generalized Linear Models - The aim of the project is to develop a series of packages, including the hglm package, which implement the estimation algorithm of different random effects models based on the hierarchical likelihood theory.
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- Programming Language : R [Filter]
- Topic : Genetics : QTL Mapping [Filter]
- Topic : Multivariate Statistics : Linear Models [Filter]
- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
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Registered: 2009-10-02 07:07 |
14. vcf2geno: reading VCF made easy - Efficiently Read Variant Call Format (VCF) into R
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- Development Status : 4 - Beta [Filter]
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Registered: 2012-08-22 01:29 |
15. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions.
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- Development Status : 4 - Beta [Filter]
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- Natural Language : German [Filter]
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2012-03-28 07:52 |
16. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs.
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : QTL Mapping [Filter]
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Registered: 2009-10-07 19:54 |
17. cRacker - cRacker automates standard normalization strategies of quantitative proteomic experiments. It simplifies the analysis of quantified peptide lists coming from various proteomic quantitation softwares.
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Registered: 2012-07-12 22:01 |
18. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model.
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Registered: 2012-07-03 03:50 |
19. Classification and Regression Training - The caret packages contain functions for tuning predictive models, pre-processing, variable importance and other tools related to machine learning and pattern recognition. Parallel processing versions of the main package are also included.
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- Topic : Machine Learning : Model Selection and Validation [Filter]
- Topic : Regression Models [Filter]
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Registered: 2008-06-05 19:31 |
151 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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