Software Map
Project Tree
Now limiting view to projects in the following categories:
License :: OSI Approved :: GNU General Public License (GPL) [Remove This Filter]
Environment :: Console (Text Based) [Remove This Filter]
Natural Language :: English [Remove This Filter]
Intended Audience :: Developers [Remove This Filter]
Development Status :: 5 - Production/Stable [Remove This Filter]
31 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Environment : X11 Applications [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-01-08 16:59 |
1. mixOmics - mixOmics is an R package that supplies different methodologies to unravel relationships between two heterogeneous data sets of size n × p and n × q where the p and q variables are measured on the same samples or individuals n. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Natural Language : French [Filter]
- Operating System : Microsoft [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Multivariate Statistics : Latent Variable Approaches [Filter]
- Topic : Multivariate Statistics : Projection Methods : Canonical Correlation [Filter]
|
Activity Percentile: 0.00
Registered: 2010-06-25 04:17 |
2. Circular Statistics - This is the circular package build over the R port of the CircStats package by Ulric Lund from 'Topics in circular Statistics' (2001) S. Rao Jammalamadaka and A. SenGupta, World Scientific. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : Fortran [Filter]
- Programming Language : R [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2007-11-06 22:41 |
3. Estimation and Model Checking for GLSM - This package mainly deals with generalized linear spatial models for estimation, model checking and prediction by using MCMC algorithms. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Environment : X11 Applications [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-08-17 10:52 |
4. mzmatch.R - This package provides integration between the mzMatch/PeakML Java library (and its file formats) and the XCMS library for R. mzMatch is a modular, open source and platform independent data processing pipeline for metabolomics LC/MS data. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Natural Language : Russian [Filter]
- Operating System : Microsoft : Windows : Windows Vista [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : Java [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
|
Activity Percentile: 0.00
Registered: 2010-10-20 17:09 |
5. survMisc - Extends the survival package with commonly used functions and plots focusing on the Cox model. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Medical Science [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Datasets [Filter]
|
Activity Percentile: 0.00
Registered: 2013-03-27 17:58 |
6. doSNOW - The doSNOW package provides a parallel backend to the foreach package's %dopar% operator that provides parallel computation via R's snow package. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : High Performance Computing : Parallel Computing [Filter]
|
Activity Percentile: 0.00
Registered: 2010-11-19 22:28 |
7. Large objects for R - Package 'ff' supports fast on-disk objects: standard and packed atomics, ffdf data.frames, csv import/export, chunking and indexing. Integrated package 'bit' supports fast in-memory booleans: 'bit' (1-bit boolean), 'bitwhich' (asymetric booleans). |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : High Performance Computing : Large Memory [Filter]
|
Activity Percentile: 0.00
Registered: 2009-07-19 10:21 |
8. MeDiChI - R package implementing model based deconvolution of ChIP-chip (transcription factor binding) data, as published in Bioinformatics journal.
Please visit http://baliga.systemsbiology.net/medichi for source code, instructions, and R package downloads. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Machine Learning : Regularized and Shrinkage Methods [Filter]
|
Registered: 2010-05-14 17:13 |
9. Sublogo dendrograms - Sublogo dendrograms are statistical graphics that reveal correlation in biological sequence alignments. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Environment : Web Environment [Filter]
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : PHP [Filter]
- Programming Language : R [Filter]
- Programming Language : Unix Shell [Filter]
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Genetics [Filter]
- Topic : Graphics : Plotting [Filter]
|
Registered: 2009-06-19 09:14 |
10. ctv: CRAN Task Views - Server-side and client-side tools for task views to CRAN-style repositories. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2007-06-08 16:40 |
11. doSMP - The doSMP package provides a parallel backend to the foreach package's %dopar% operator, allowing parallel operation on a symmetric multiprocessor workstation. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : High Performance Computing [Filter]
|
Activity Percentile: 0.00
Registered: 2010-11-19 22:27 |
12. trip -- animal tracking data - The development of trip package is now hosted on GitHub,
https://github.com/mdsumner/trip
MDSumner 2013-07-04
Location estimation, track and spatial analysis for animal tag data. |
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Programming Language : R [Filter]
- Topic : Spatial Data & Statistics : Classes for Spatial Data [Filter]
- Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]
|
Activity Percentile: 0.00
Registered: 2010-06-24 02:07 |
13. colorspace: Computing with Colorspaces - Functions for computing coordinate conversions between colorspaces. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Graphics : Colors [Filter]
|
Activity Percentile: 0.00
Registered: 2007-02-15 19:23 |
14. The Soil Texture Wizard - The project has now moved to GitHub: https://github.com/julienmoeys/soiltexture |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Environmetrics [Filter]
- Topic : Graphics : Plotting [Filter]
|
Activity Percentile: 0.00
Registered: 2010-04-08 12:28 |
15. AICTS II - VAR, SVAR, VECM and SVECM models: Estimation, prediction, impulse response analysis, forecast error variance decomposition, diagnostic testing. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Econometrics : Time Series Modelling [Filter]
- Topic : Finance : Time Series [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2007-08-23 15:35 |
16. unit and system testing for R - rtest was a fork from RUnit. the author started it because he needed Hudson/Jenkins output from R and he did not manage to contact the developers of RUnit.
Status: unmantained.
Alternative: svUnit (SciVews). |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Environment : Web Environment [Filter]
- Intended Audience : Developers (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2010-09-21 08:01 |
17. SPRINT: Simple Parallel R INTerface - SPRINT is a Simple Parallel R INTerface to High Performance Computing (HPC) that enables biologists to run statistical analysis scripts using R in parallel on HPC clusters. It consists of an HPC harness and a library of parallelized R functions. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : High Performance Computing : Parallel Computing [Filter]
|
Activity Percentile: 0.00
Registered: 2009-11-20 16:56 |
18. AICTS I - Unit root and cointegration tests encountered in applied econometric analysis. |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Econometrics : Time Series Modelling [Filter]
- Topic : Finance : Time Series [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2007-08-23 15:29 |
19. R/exams: Automatic Generation of Exams - One-for-all exams generator. Exercises: Single-choice, multiple-choice, arithmetic, string, combinations thereof (cloze). Input formats: LaTeX, Markdown. Output formats: PDF, HTML, Docx, Moodle XML, QTI 1.2, QTI 2.1, Blackboard, OLAT, Ilias, ARSnova, ... |
- Development Status : 5 - Production/Stable (Now Filtering)
- Environment : Console (Text Based) (Now Filtering)
- Intended Audience : Developers (Now Filtering)
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Connectivity [Filter]
- Topic : Education [Filter]
- Topic : Text [Filter]
|
Activity Percentile: 0.00
Registered: 2012-02-12 00:43 |
31 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>