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34 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. OOMPA - OOMPA is a suite of R packages for the analysis of gene expression (RNA), proteomics profiling , and other high throughput molecular biology data. OOMPA uses S4 classes to construct object-oriented tools with a consistent user interface. |
- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : Artistic License [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Cluster Analysis [Filter]
- Topic : Multivariate Statistics (Now Filtering)
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Activity Percentile: 41.67
Registered: 2013-08-29 17:48 |
1. Benchmarking genomic data integration - Comparison pipeline for multi-platform data integration algorithms for functional genomics studies. Provides tools to compare performance between publicly available implementations |
- Development Status : 4 - Beta [Filter]
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
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- Intended Audience : Developers [Filter]
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- License : OSI Approved : BSD License [Filter]
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- Topic : Bioinformatics [Filter]
- Topic : Genetics [Filter]
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Registered: 2011-02-02 00:51 |
2. DirichletReg - Dirichlet Regression - This project implements Dirichlet regression models for the analysis of compositional data. Starting with the basic fit routines, new functions (model selection, graphics, etc.) will be added and tested here, before being submitted to CRAN. |
- Development Status : 4 - Beta [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Multivariate Statistics (Now Filtering)
- Topic : Regression Models [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
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Registered: 2010-09-26 14:19 |
3. inspectr - Handling and analysis of Vis-NIR spectra, especially for soil science. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Chemoinformatics [Filter]
- Topic : Environmetrics [Filter]
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Registered: 2011-06-08 03:22 |
4. list - Statistical Methods for the Item Count Technique and List Experiment |
- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Econometrics : Further Regression Models [Filter]
- Topic : Multivariate Statistics (Now Filtering)
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Registered: 2011-04-16 20:16 |
5. RDataMining - a package for data mining - A comprehensive R Package for Data Mining, with contributions from many R users.
If you have developed or will implement any data mining algorithms in R, please participate in this project to make your work available to R users worldwide. |
- Development Status : 1 - Planning [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Cluster Analysis [Filter]
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Registered: 2012-06-06 05:19 |
6. The adegenet package - The package adegenet is devoted to the multivariate analysis of genetic markers data. |
- Development Status : 4 - Beta [Filter]
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- Natural Language : French [Filter]
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- Topic : Genetics : Population Genetics [Filter]
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- Topic : Spatial Data & Statistics [Filter]
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Registered: 2008-01-06 17:38 |
7. Range Correlations - Methods from spatial statistics are adapted and implemented to be used for assessing marginal and partial correlations in range and site data (positional data) along genomes based on the Bioconductor package GenomicRanges. |
- Development Status : 1 - Planning [Filter]
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Registered: 2011-03-07 18:54 |
8. Diagnostic and prognostic meta-analysis - This package provides functions for diagnostic and prognostic meta-analyses. It estimates univariate, bivariate and multivariate models, and allows the aggregation of previously published prediction models with new data. |
- Development Status : 3 - Alpha [Filter]
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- Topic : Biostatistics & Medical Statistics [Filter]
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Registered: 2012-08-09 13:01 |
9. vegan - Community Ecology Package - 'vegan' is a CRAN package for the analysis of ecological communities. It has tools for analysing ecological diversity, and for the multivariate analysis of communities (NMDS, pCCA, pRDA etc.) - Development on R-Forge discontinued, go to https://github.com/vegandevs/ |
- Development Status : 5 - Production/Stable [Filter]
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- Programming Language : Fortran [Filter]
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2007-09-05 13:59 |
10. Conditional multivariate extremes - Generalized Pareto distribution modelling, including penalized likelihood and Bayesian methods, and conditional multivariate extreme value modelling.
PROJECT MIGRATED TO Google Code: https://code.google.com/p/texmex/ |
- Development Status : 5 - Production/Stable [Filter]
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
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Registered: 2010-09-17 12:42 |
11. Muste - the R implementation of Survo - Muste - Multiplatform Survo Type Editorial Environment for Data Analysis |
- Development Status : 4 - Beta [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
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- Topic : Graphical User Interface [Filter]
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Registered: 2011-06-27 14:20 |
12. Local Depth - The package "localdepth" contains functions for the evaluation of some Depth functions and their corresponding local versions, namely Local Depths. Simplicial, Ellipsoid and Mahalanobis Depths are implemented for general dimension. |
- Development Status : 2 - Pre-Alpha [Filter]
- Environment : Console (Text Based) [Filter]
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- Programming Language : Fortran [Filter]
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- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
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- Topic : Robust Statistics [Filter]
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Registered: 2008-09-16 15:34 |
13. pcurve: principal curves - Package pcurve fits principal curves in high dimensions. It can be thought of as a non-linear form of PCA. pcurve is an R port of Glenn De'aths pcurve library for S-Plus. |
- Development Status : 5 - Production/Stable [Filter]
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- Topic : Environmetrics [Filter]
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Activity Percentile: 0.00
Registered: 2013-05-30 16:42 |
14. sem.additions - Additional methods for the analysis of structural equation models. NOTE: THIS PROJECT IS NO LONGER UPDATING. ALL IMPORTANT METHODS, SAVE SOME PLOTTING FUNCTION, ARE NOW PART OF THE SEM PACKAGE. |
- Development Status : 3 - Alpha [Filter]
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Registered: 2008-09-02 18:43 |
15. umx: A helper library for SEM in OpenMx - umx provides functions making it easy to build, run, modify, and report the results of Structural Equation Models (SEM) using OpenMx. Examples include setting start values: umxStart(); labels: umxLabel(); and reporting; umxSummary(). |
- Development Status : 4 - Beta [Filter]
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- Topic : Genetics [Filter]
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- Topic : Optimization : General Purpose Continuous Solvers [Filter]
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Registered: 2013-08-28 13:52 |
16. UMPIRE - UMPIRE provides tools to simulate realistic biological expression data. It includes additive and multiplicative noise, correlated expression, inactive genes, and a link to outcome data that incorporates the multi-hit cancer model. |
- Development Status : 5 - Production/Stable [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2014-02-03 16:37 |
17. vegsoup - classes for phytosociology - S4 classes for vegetation-plot data (relevés) documenting community structure, sites data, taxonomy and spatial representation. Methods are provided for data manipulation, clustering, indicator species analysis and typesetting tables with LaTex. |
- Development Status : 3 - Alpha [Filter]
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Registered: 2011-06-07 12:24 |
18. Mutoss - Mutoss (multiple hypotheses testing in an open software system) aims at providing a unified, extensible interface covering a large spectrum of multiple hypotheses testing procedures in R. Features a GUI and a simulation tool. Funded by PASCAL2. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- Programming Language : Java [Filter]
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- Topic : Education : GUI [Filter]
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Registered: 2010-02-11 12:32 |
19. pi0 estimators - Estimation of the proportion of true null hypotheses (pi0) from a large number of hypothesis tests; Non/parametric recovery of noncentrality parameter distribution; False discovary rates (FDR) computation. |
- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : X11 Applications [Filter]
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : Multiple Testing [Filter]
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Activity Percentile: 0.00
Registered: 2010-03-21 02:01 |
34 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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