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61 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Integer and Nonlinear Optimization in R - The project "Integer and Nonlinear Optimization in R (RINO)" provides the packages Rbonmin, Rlago (both interfaces to MINP solvers) and solnp.
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- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
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Registered: 2008-03-14 14:49 |
1. Evolution simulation and classification - After measuring gene frequencies of modern populations that have a common ancestor, we estimate ancestral allele frequency and selection state for each gene. A bayesian model is used and verified using the included simulator.
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : Population Genetics [Filter]
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Registered: 2009-07-30 17:27 |
2. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.
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Registered: 2013-11-21 21:46 |
3. CorReg - find a structure explaining correlations between covariates and use it to compute linear regression. It provides an efficient new estimator for recursive SEM.
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- Topic : Econometrics : Linear Regression Models [Filter]
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- Topic : Robust Statistics [Filter]
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Registered: 2013-11-14 14:32 |
4. Analysis of multi-electrode array data - Functions for the analysis of spike-trains recorded using multi-electrode arrays. Tools include simple visualisation, movie generation, burst analysis, network spikes and episode detection.
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Registered: 2012-04-07 09:14 |
5. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD.
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Registered: 2009-06-17 16:54 |
6. Variant Pattern Analyzer - VPA (Variant Pattern Analyzer) is an R package for prioritizing variants with user-specified frequency pattern from multiple study subjects in next generation sequencing study.
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Registered: 2011-08-05 14:30 |
7. Species Distribution Modelling tools - THIS PROJECT HAS MOVED to http://rforge.net/SDMTools/ ... Provided will be a set of tools for processing the outcomes of species distribution models.
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2010-02-17 21:58 |
8. KDE & MDS - Helper functions for plotting KDEs and MDS maps of geochronology and geochemistry data, for visualisation of age distributions and sample comparison.
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- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
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Registered: 2014-03-11 14:23 |
9. Composite Likelihood for Random Fields - Composite-Likelihood based methods for Random Fields.
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Registered: 2010-02-08 16:57 |
10. netbenchmark - The development version of netbenchmark package, which implements a benchmarking of several gene network inference algorithms from gene expression data.
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Registered: 2014-11-28 09:55 |
11. nloptr - an R interface to NLopt - nloptr provides an R interface to NLopt, a free/open-source library for nonlinear optimization providing a common interface to a number of different optimization routines which can handle nonlinear constraints and lower and upper bounds for the controls.
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- Topic : Optimization : General Purpose Continuous Solvers [Filter]
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Registered: 2010-10-30 18:59 |
12. mrp - MOVED TO GITHUB: https://github.com/malecki/mrp
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- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
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Registered: 2009-09-21 14:11 |
13. Distance Weighted Discrimination (DWD) - Distance Weighted Discrimination (DWD) is a machine learning tool similar to SVM but with better breakdown properties as the number of variables increases in relationship to the number of observations.
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- Topic : Machine Learning : Support Vector Machines [Filter]
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Registered: 2011-10-21 13:31 |
14. Analysis of phenological digital imagery - The package phenopix provides functions to process digital images of a vegetation cover, depict greennes index trajectories and extract relevant phenological stages.
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Registered: 2014-09-23 08:50 |
15. Symphony in R - An R interface to the SYMPHONY MILP solver.
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Registered: 2007-12-17 15:44 |
16. Tools for Uplift Modeling - The R Package tools4uplift integrates some tools for exploring and modeling uplift. The content can be separated into the following steps of statistical modeling: quantization, visualization, model selection and model validation.
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Registered: 2018-08-31 21:23 |
17. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp
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Registered: 2013-05-29 18:34 |
18. Dave Armstrong's Misc Functions - Package contains functions to aid in the presentation and interpretation of GLMs and related models. These include utilities to help deal with present interactions in linear and logit/probit models, first differences in predicted probabilities, etc...
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Registered: 2012-05-07 16:37 |
19. ipoptr - an R interface to Ipopt - ipoptr provides an R interface to Ipopt (Interior Point OPTimizer), a software package to solve general nonlinear programming problems with nonlinear constraints and lower and upper bounds for the controls.
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Registered: 2010-08-23 20:33 |
61 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
