Software Map
Project Tree
Now limiting view to projects in the following categories:
Intended Audience :: End Users/Desktop [Remove This Filter]
Programming Language :: R [Remove This Filter]
Natural Language :: English [Remove This Filter]
Development Status :: 4 - Beta [Remove This Filter]
Programming Language :: C/C++ [Remove This Filter]
27 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. Clustering using convex fusion penalties - An R/C++ implementation of the clusterpath algorithm described in Hocking et al. 2011, for robust convex clustering using sparsity-inducing fusion penalties. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : Python [Filter]
- Programming Language : R (Now Filtering)
- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Machine Learning : Regularized and Shrinkage Methods [Filter]
- Topic : Optimization [Filter]
|
Registered: 2011-05-09 12:56 |
1. Nonparametrics for Clustered Binary Data - CorrBin implements nonparametric methods for analysing exchangeable binary and multinomial data with variable cluster sizes with emphasis on trend testing. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Biostatistics & Medical Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2008-10-02 19:05 |
2. adephylo - The package 'adephylo' implements multivariate approaches for comparative data, i.e. data including one phylogeny and one or several traits. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Genetics : Phylogenetics [Filter]
- Topic : Multivariate Statistics : Projection Methods [Filter]
|
Activity Percentile: 0.00
Registered: 2008-11-18 15:35 |
3. Multiple Cue Probability Learning - mcplR offers a flexible (S4) framework to investigate multiple cue probability learning (MCPL). mcplR incorporates a number of learning models (Rescorla-Wagner, GCM, ALCOVE, etc) in a general state-space framework, where new models can be easily added. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Social Sciences [Filter]
|
Activity Percentile: 0.00
Registered: 2007-09-07 14:37 |
4. Yasomi: Self-Organising Map in R - Yasomi is Yet Another Self-Organising Map Implementation. It provides an implementation of Kohonen's SOM, with extension to kernel variants and comprehensive visualisation capabilities. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Natural Language : French [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Cluster Analysis [Filter]
- Topic : Machine Learning : Neural Networks [Filter]
- Topic : Multivariate Statistics : Unsupervised Classification [Filter]
|
Activity Percentile: 0.00
Registered: 2011-02-25 12:40 |
5. Conditional Random Fields - This project provides a set of tools for conditional random fields tasks such as decoding/inference/sampling/training. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Graphical Models [Filter]
- Topic : Machine Learning [Filter]
|
Activity Percentile: 0.00
Registered: 2010-12-28 07:13 |
6. Corbi - A collection of bioinformatics tools for general purposes such as network query, protein structure alignment, gene expression analysis. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- Intended Audience : Other Audience [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-09-26 05:04 |
7. TikZ Device - A Device for LaTeX-friendly output of R graphics in the PGF/TikZ Format |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Graphics : Devices [Filter]
|
Activity Percentile: 0.00
Registered: 2009-05-31 23:42 |
8. TopKLists - The package includes tools for inference, aggregation, and visualization of multiple ranked lists. Consolidated information from two or more such lists comprising the same set of objects can be obtained. Incomplete rankings and partial lists are allowed. |
- Development Status : 4 - Beta (Now Filtering)
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Environment : Win32 (MS Windows) [Filter]
- Environment : X11 Applications [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics [Filter]
- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Marketing & Business Analytics [Filter]
|
Activity Percentile: 0.00
Registered: 2010-05-06 10:59 |
9. Regression Models for Ordinal Data - This project hosts the R-package 'ordinal'. The ordinal R-package implements likelihood based models for ordinal (ordered categorical) data based on cumulative probabilities in the framework of cumulative link (mixed) models. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Regression Models [Filter]
- Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
|
Activity Percentile: 0.00
Registered: 2010-06-12 18:24 |
10. Markov decision processes (MDPs) in R - Create and optimize MDPs with discrete time steps and state space. Both normal MDPs and hierarchical MDPs can be considered. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Optimization [Filter]
- Topic : Other/Nonlisted Topic [Filter]
|
Activity Percentile: 0.00
Registered: 2009-06-08 12:06 |
11. Gradient forest - Detecting biological composition patterns along environmental gradients from site-by-species ecological data. Package gradientForest calculates the gradients from split-point importances provided by auxiliary package extendedForest, based on randomForest. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : Fortran [Filter]
- Programming Language : R (Now Filtering)
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2011-01-06 08:05 |
12. simecol - Ecological Models with R - simecol allows to implement ecological models (ODEs, IBMs, ...) using a template-like object-oriented stucture. It helps to organize scenarios and may also be useful for other areas. |
- Development Status : 4 - Beta (Now Filtering)
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R (Now Filtering)
- Programming Language : Tcl [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Software Development [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
|
Activity Percentile: 0.00
Registered: 2008-02-20 20:34 |
13. waveslim: Wavelet methods for 1/2/3D - Basic wavelet routines for the processing/analysis/inference of time series, images and 3D arrays. The code provided here is based on Percival and Walden (2000); Gencay, Selcuk and Whitcher (2001); Kingsbury (1999); and Selesnick (200?). |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : Fortran [Filter]
- Programming Language : R (Now Filtering)
- Topic : Econometrics [Filter]
- Topic : Finance [Filter]
- Topic : Time Series [Filter]
|
Activity Percentile: 0.00
Registered: 2009-02-26 17:20 |
14. analogue - quantitative palaeoecology - analogue fits Modern Analogue Technique (MAT) and Weighted Averaging (WA) transfer function models for prediction of environmental data from species data. |
- Development Status : 4 - Beta (Now Filtering)
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Time Series [Filter]
|
Registered: 2007-09-07 13:38 |
15. spatial copula - This package has moved to: https://github.com/bengraeler/spcopula |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
- Topic : Multivariate Statistics : Multivariate Distributions : Copulae [Filter]
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-03-21 17:39 |
16. partykit: Recursive Partytioning Toolkit - Infrastructure for representing, summarizing, and visualizing tree-structured models. It can be used for constructing or reading tree models from different sources (rpart, RWeka, PMML), sharing
functionality for print/plot/predict methods. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Machine Learning : Recursive Partitioning [Filter]
- Topic : Regression Models [Filter]
- Topic : Software Development [Filter]
|
Activity Percentile: 0.00
Registered: 2008-09-30 11:39 |
17. Earth Mover Distance - EarthMovDist implements the Earth Movers distance in R. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- License : Other/Proprietary License [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Other/Nonlisted Topic [Filter]
- Topic : Spatial Data & Statistics [Filter]
|
Activity Percentile: 0.00
Registered: 2009-02-17 06:53 |
18. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties. |
- Development Status : 4 - Beta (Now Filtering)
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Bayesian Statistics [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2011-10-11 08:51 |
19. Bayesian Fractional Polynomials - The package implements the Bayesian paradigm for fractional polynomial models under the assumption of normally distributed error terms. |
- Development Status : 4 - Beta (Now Filtering)
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop (Now Filtering)
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English (Now Filtering)
- Operating System : OS Independent [Filter]
- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R (Now Filtering)
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
|
Activity Percentile: 0.00
Registered: 2009-09-23 10:25 |
27 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>