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6 projects in result set.
0. pi0 estimators - Estimation of the proportion of true null hypotheses (pi0) from a large number of hypothesis tests; Non/parametric recovery of noncentrality parameter distribution; False discovary rates (FDR) computation. |
- Development Status : 3 - Alpha [Filter]
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- Topic : Multivariate Statistics [Filter]
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Registered: 2010-03-21 02:01 |
1. casper - casper infers alternative splicing from high-throughput sequencing data both for known variants and de novo discovery. We use a Bayesian model with few assumptions, and modern model selection ideas with improved theoretical and computational properties. |
- Development Status : 4 - Beta [Filter]
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- Topic : Bayesian Statistics [Filter]
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Registered: 2011-10-11 08:51 |
2. MeDiChI - R package implementing model based deconvolution of ChIP-chip (transcription factor binding) data, as published in Bioinformatics journal.
Please visit http://baliga.systemsbiology.net/medichi for source code, instructions, and R package downloads. |
- Development Status : 5 - Production/Stable [Filter]
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- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics (Now Filtering)
- Topic : Machine Learning : Regularized and Shrinkage Methods [Filter]
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Registered: 2010-05-14 17:13 |
3. survGenesInterim - Simulation of survival studies based on simulated gene expression level and patient data. Includes functions to generate such data. Resulting error and power rate can be visualized. Can be used for sample size or power estimation when planning a study. |
- Development Status : 5 - Production/Stable [Filter]
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- Topic : Bioinformatics : Medical Science [Filter]
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- Topic : Multivariate Statistics : Supervised Classification and Discriminant Analysis [Filter]
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Registered: 2011-04-19 11:00 |
4. sonicLength - sonicLength estimates the abundances of cells marked with integrated DNA using DNA fragment length data. Also included are tools for random number generation apropos to fragment lengths, simulating datasets, and jackknifing multiple replicates |
- Development Status : 5 - Production/Stable [Filter]
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Registered: 2011-09-14 03:27 |
5. msap - The package msap provides a easy way to analyse MSAP (Methylation-Sensible Amplified Polymorphism) data in order to asses epigenetic and genetic differences between groups of samples. |
- Development Status : 5 - Production/Stable [Filter]
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Registered: 2012-06-13 23:35 |