Software Map
Project Tree
Now limiting view to projects in the following categories:
Programming Language :: C/C++ [Remove This Filter]
Environment :: Console (Text Based) [Remove This Filter]
Operating System :: POSIX :: Linux [Remove This Filter]
Environment > Console (Text Based) |
Browse By: |
32 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
0. Polyphase - This method accepts the genotype data, the relative physical position of the markers for species of any ploidy and returns the phased output. | |
|
Activity Percentile: 0.00 Registered: 2016-02-18 15:57 |
1. Rlsf - This package provides functions for using R with the LSF cluster/grid queuing system. | |
|
Activity Percentile: 0.00 Registered: 2008-06-25 19:02 |
2. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp | |
|
Activity Percentile: 0.00 Registered: 2013-05-29 18:34 |
3. wtJonckheere - Non-parametric Jonckheere-Terpstra trend test on weighted data | |
|
Activity Percentile: 0.00 Registered: 2014-06-20 10:11 |
4. Estimation and Model Checking for GLSM - This package mainly deals with generalized linear spatial models for estimation, model checking and prediction by using MCMC algorithms. | |
|
Activity Percentile: 0.00 Registered: 2011-08-17 10:52 |
5. Nvidia thrust column-major matrices func - This package provides basic R functions made with a help of nvidia thrust for GPU computation in linux environment. The implementation is based on the NVIDIA CUDA Toolkit 4.0. | |
|
Activity Percentile: 0.00 Registered: 2011-06-10 12:13 |
6. Genome-wide analysis using MOSS - Performs genome-wide analysis of dense SNP array data using the mode oriented stochastic search (MOSS) algorithm in a case-control design. Includes preprocessing of the data from Plink format to the format required by the MOSS algorithm. | |
|
Activity Percentile: 0.00 Registered: 2011-01-07 17:53 |
7. Protocol for Adjust & Select Models - This project is about modeling species abundances in communities. | |
|
Activity Percentile: 0.00 Registered: 2011-01-18 16:54 |
8. Composite Likelihood for Random Fields - Composite-Likelihood based methods for Random Fields. | |
|
Activity Percentile: 0.00 Registered: 2010-02-08 16:57 |
9. doSMP - The doSMP package provides a parallel backend to the foreach package's %dopar% operator, allowing parallel operation on a symmetric multiprocessor workstation. | |
|
Activity Percentile: 0.00 Registered: 2010-11-19 22:27 |
10. GWAtoolbox - An R-package implemented for genome-wide association studies. The main feature is very vast quality check of data before meta-analysis. It provides an extensive list of quality statistics presented using easy-to-use DHTML and graphical outputs. | |
|
Activity Percentile: 0.00 Registered: 2011-03-23 10:20 |
11. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD. | |
|
Registered: 2009-06-17 16:54 |
12. bclust - Bayesian clustering with variable selection is a fully automatic clustering method, designed for low-sample-size-high-dimensional situations. This might be regarded as a high-dimensional variant of the mclust package. | |
|
Activity Percentile: 0.00 Registered: 2009-02-18 10:01 |
13. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering. | |
|
Activity Percentile: 0.00 Registered: 2009-02-18 09:38 |
14. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor. | |
|
Activity Percentile: 0.00 Registered: 2010-04-01 17:54 |
15. Low Rank Gaussian Process Regression - Fit a Low Rank Gaussian Process Regression / Linear Mixed Model for large datasets. These models are widely used in statistical genetics as a test of association while correcting for the confounding effects of kinship and population structure. | |
|
Activity Percentile: 0.00 Registered: 2013-12-19 15:12 |
16. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods | |
|
Registered: 2011-01-24 12:50 |
17. X-METRIC Inventory Optimizations - Multi-Echelon Techniques for Recoverable Item Control and its variants MOD-METRIC, VARI-METRIC and related extensions | |
|
Activity Percentile: 0.00 Registered: 2013-08-24 22:00 |
18. FLR - A framework for fisheries modelling and management strategy simulation in R. Models can used to generate accurate simulations of fishery systems: stocks, fleets, assessment and management processes. http://flr-project.org | |
|
Activity Percentile: 0.00 Registered: 2008-12-10 14:47 |
19. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition. | |
|
Registered: 2013-01-21 21:13 |
32 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>