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0. SynergizeR - This package provides programmatic access to The Synergizer service for translating between sets of biological identifiers.
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- Development Status : 3 - Alpha [Filter]
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- Topic : Bioinformatics : Medical Science [Filter]
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Registered: 2011-11-04 17:46 |
1. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files.
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- Topic : Bioinformatics : Visualization [Filter]
- Topic : Genetics [Filter]
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Registered: 2010-01-08 16:59 |
2. Phylobase Extension - This package provides classes and methods which help read/write/manipulate branch-annotated phylogenetic trees (SIMMAP-format) and supports for a few other extra phylogenetic tree features (like tree weight).
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- Topic : Genetics : Phylogenetics [Filter]
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Registered: 2011-04-26 02:20 |
3. NeuroSpatCo - The package is used to search for patterns of organization in human prefrontal cortex of both horizontal (cell body) and vertical plane (minicolumns).
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- Programming Language : Tcl [Filter]
- Topic : Cluster Analysis : Other Cluster Algorithms [Filter]
- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2011-05-10 20:54 |
4. addendum - Utility functions that should have been in R: easy glmnet, pretty graphing and swift debugging and profiling.
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- Topic : Machine Learning : Model Selection and Validation [Filter]
- Topic : Multivariate Statistics : Missing Data [Filter]
- Topic : Regression Models [Filter]
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Registered: 2011-06-17 13:35 |
5. foreach - The foreach package provides support for the foreach looping construct. Foreach is an idiom that allows for iterating over elements in a collection, without the use of an explicit loop counter.
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- Topic : High Performance Computing : Parallel Computing [Filter]
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Registered: 2010-11-18 22:18 |
6. R2scheme - Compile R code to binary machine code and dynamically link the binary to R using the bigloo scheme compiler.
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- Programming Language : Lisp [Filter]
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Registered: 2010-11-03 09:48 |
7. doSNOW - The doSNOW package provides a parallel backend to the foreach package's %dopar% operator that provides parallel computation via R's snow package.
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Registered: 2010-11-19 22:28 |
8. mrp - MOVED TO GITHUB: https://github.com/malecki/mrp
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
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Registered: 2009-09-21 14:11 |
9. Linear quantile mixed models - This project is aimed at developing an R package to fit and analyse quantile regression models with random effects.
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Registered: 2012-05-15 16:23 |
10. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model.
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- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2012-07-03 03:50 |
11. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions.
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
- Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]
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Registered: 2012-03-28 07:52 |
12. dcGOR - dcGOR is a package for analysing domain-centric ontologies and annotations. It includes: enrichment analysis and visualisation; construction of a domain (semantic similarity) network; significance analysis for a contact network.
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Registered: 2014-10-23 15:21 |
13. netbenchmark - The development version of netbenchmark package, which implements a benchmarking of several gene network inference algorithms from gene expression data.
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Registered: 2014-11-28 09:55 |
14. rPithon: use Python over a 'pipe' - rPithon is based on rPython but instead of linking to the Python libraries, a Python program is started and is communicated with using a 'pipe'. This allows different R programs/packages to use different Python instances if desired.
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Registered: 2014-12-24 12:43 |
15. Modelling Peaks Over Threshold - The project consists in developing functions for peaks over threshold modeling. Most of results come from the extreme value theory (EVT). The EVT is currently extensively used, mostly in environmental sciences and finance.
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- Topic : Finance : Risk Management : Value at Risk [Filter]
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Registered: 2007-09-21 14:29 |
16. RHRV - Package for carrying out heart rate variability studies of ECG records
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Registered: 2010-10-14 10:22 |
17. lme4 - Mixed-effects models - An R package for fitting and analyzing linear, nonlinear and generalized linear mixed models.
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- Topic : Regression Models [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
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Registered: 2007-08-17 17:27 |
18. Foreign Function Interface - A Foreign Function Interface for R
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Registered: 2007-04-17 20:46 |
19. Finite Mixure of AFT and FMR models - FMRS package provides estimation and variable selection in Finite Mixture of Accelerated Failure Time Regression (FMAFTR) and Finite Mixture of Regression (FMR) models with a large number of covariates and/or right censoring and heterogeneous structure.
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Registered: 2016-03-07 02:31 |
60 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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