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173 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Classification and Regression Training - The caret packages contain functions for tuning predictive models, pre-processing, variable importance and other tools related to machine learning and pattern recognition. Parallel processing versions of the main package are also included.
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- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Machine Learning : Model Selection and Validation [Filter]
- Topic : Regression Models [Filter]
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Registered: 2008-06-05 19:31 |
1. Atlas and Analysis - Atlas and Analysis (A2) of pathways (curated)
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- Development Status : 3 - Alpha [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Bioinformatics [Filter]
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Registered: 2018-01-19 16:21 |
2. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor.
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Operating System : Microsoft : Windows : Windows Vista [Filter]
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
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Registered: 2010-04-01 17:54 |
3. Rcplex - Interface to the CPLEX optimization engine. Supports Linux and Windows.
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- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU Lesser General Public License (LGPL) [Filter]
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
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- Programming Language : R (Now Filtering)
- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
- Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]
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Registered: 2008-08-04 05:27 |
4. arules - Mining Association Rules - Infrastructure for representing, manipulating and analyzing transaction data and patterns (frequent itemsets and association rules).
arules is now maintained on Github: https://github.com/mhahsler/arules
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- Topic : Machine Learning [Filter]
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Registered: 2007-05-21 13:55 |
5. wtJonckheere - Non-parametric Jonckheere-Terpstra trend test on weighted data
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- Development Status : 2 - Pre-Alpha [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Programming Language : R (Now Filtering)
- Topic : Robust Statistics [Filter]
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Registered: 2014-06-20 10:11 |
6. rPithon: use Python over a 'pipe' - rPithon is based on rPython but instead of linking to the Python libraries, a Python program is started and is communicated with using a 'pipe'. This allows different R programs/packages to use different Python instances if desired.
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Registered: 2014-12-24 12:43 |
7. plm: linear models for panel data - A set of estimators and tests for panel data
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- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Operating System : POSIX : Linux [Filter]
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- Topic : Econometrics : Further Regression Models [Filter]
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Registered: 2009-04-21 10:17 |
8. Extreme Values in R (evir) - Extreme Value in R: Functions for extreme value theory, which may be divided into the following groups; exploratory data analysis, block maxima, peaks over thresholds (univariate and bivariate), point processes, gev/gpd distributions.
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- Development Status : 4 - Beta [Filter]
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- Topic : Econometrics : Time Series Modelling [Filter]
- Topic : Finance : Risk Management [Filter]
- Topic : Time Series [Filter]
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Registered: 2011-03-21 13:20 |
9. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model.
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- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2012-07-03 03:50 |
10. COXMEG - COXMEG provides a tool to fit a Cox mixed-effects model, incorporating fast algorithms for genome-wide association analysis.
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- Development Status : 3 - Alpha [Filter]
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Registered: 2019-08-02 18:19 |
11. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering.
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- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
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- Programming Language : C/C\+\+ [Filter]
- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Visualization [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
- Topic : Machine Learning : Bayesian Methods [Filter]
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Registered: 2009-02-18 09:38 |
12. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs.
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- Development Status : 4 - Beta [Filter]
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- Programming Language : R (Now Filtering)
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : QTL Mapping [Filter]
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Registered: 2009-10-07 19:54 |
13. Bayesian Estimation and Model Checking - This package mainly deals with generalized linear spatial models in Bayesian way for estimation, prediction and model checking.
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- Development Status : 4 - Beta [Filter]
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- Environment : X11 Applications : Gnome [Filter]
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- Topic : Bayesian Statistics [Filter]
- Topic : Multivariate Statistics [Filter]
- Topic : Spatial Data & Statistics : Geostatistics [Filter]
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Registered: 2011-08-18 03:20 |
14. ParallABEL - ParallABEL aims to speed up the computation of GWA studies and also simplify parallelization in analysis of this important research area.
See http://www.sc.psu.ac.th/units/genome/CGBR/ParallABEL/index.html for more details.
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Registered: 2010-04-23 07:05 |
15. mrp - MOVED TO GITHUB: https://github.com/malecki/mrp
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- Development Status : 1 - Planning [Filter]
- Development Status : 4 - Beta [Filter]
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- Intended Audience : System Administrators [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Operating System : Microsoft [Filter]
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- Programming Language : R (Now Filtering)
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
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Registered: 2009-09-21 14:11 |
16. Extremal processes - Modelling and Analysis of Extremal Processes
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- Development Status : 3 - Alpha [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Environmetrics [Filter]
- Topic : Multivariate Statistics [Filter]
- Topic : Spatial Data & Statistics [Filter]
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Registered: 2010-01-28 09:50 |
17. spsextante - R to Sextante interface - Provides a suite of geospatial analysis tools by connecting R with the Sextante geograrphical information system (www.sextantegis.com), similar to spgrass6 and RSAGA.
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- Development Status : 1 - Planning [Filter]
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- Natural Language : German [Filter]
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Registered: 2009-04-06 14:06 |
18. Analysis of multi-electrode array data - Functions for the analysis of spike-trains recorded using multi-electrode arrays. Tools include simple visualisation, movie generation, burst analysis, network spikes and episode detection.
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- Development Status : 4 - Beta [Filter]
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Registered: 2012-04-07 09:14 |
19. toyRpkg - A toy R package demonstrating features of R packaging. Plus, some useful functions would be included.
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- Development Status : 1 - Planning [Filter]
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- Operating System : POSIX : Linux [Filter]
- Programming Language : Fortran [Filter]
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- Topic : Education [Filter]
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Registered: 2011-11-11 21:14 |
173 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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