Software Map

Project Tree

Project Tree

Now limiting view to projects in the following categories:
Operating System :: POSIX :: Linux [Remove This Filter]
Environment :: Console (Text Based) [Remove This Filter]

Operating System > POSIX > Linux

Browse By:

83 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>

0. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor.

Development Status : 4 - Beta [Filter]
Environment : Console (Text Based) (Now Filtering)
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS [Filter]
Operating System : Microsoft : Windows : Windows Vista [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Statistics [Filter]
Topic : Cluster Analysis : Hierarchical Clustering [Filter]
Topic : Cluster Analysis : Model-based Clustering [Filter]

Activity Percentile: 0.00

Registered: 2010-04-01 17:54

1. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering.

Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) (Now Filtering)
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS [Filter]
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Visualization [Filter]
Topic : Cluster Analysis : Model-based Clustering [Filter]
Topic : Machine Learning : Bayesian Methods [Filter]

Activity Percentile: 0.00

Registered: 2009-02-18 09:38

2. d/p/q/r functions of Coxian distribution - The package provides the d/p/q/r functions of a Coxian distribution.

Development Status : 1 - Planning [Filter]
Environment : Console (Text Based) (Now Filtering)
Intended Audience : End Users/Desktop [Filter]
License : Public Domain [Filter]
Natural Language : English [Filter]
Operating System : MacOS [Filter]
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : R [Filter]
Topic : High Performance Computing [Filter]
Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
Topic : Other/Nonlisted Topic [Filter]

Activity Percentile: 0.00

Registered: 2016-12-08 01:53

3. bclust - Bayesian clustering with variable selection is a fully automatic clustering method, designed for low-sample-size-high-dimensional situations. This might be regarded as a high-dimensional variant of the mclust package.

Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) (Now Filtering)
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS [Filter]
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Statistics [Filter]
Topic : Cluster Analysis : Hierarchical Clustering [Filter]
Topic : Cluster Analysis : Model-based Clustering [Filter]

Activity Percentile: 0.00

Registered: 2009-02-18 10:01

4. ParallABEL - ParallABEL aims to speed up the computation of GWA studies and also simplify parallelization in analysis of this important research area. See http://www.sc.psu.ac.th/units/genome/CGBR/ParallABEL/index.html for more details.
Environment : Console (Text Based) (Now Filtering) Intended Audience : End Users/Desktop [Filter] License : OSI Approved : GNU General Public License (GPL) [Filter] Natural Language : English [Filter] Operating System : POSIX : Linux (Now Filtering) Programming Language : R [Filter] Topic : Bioinformatics : Statistics [Filter]	Activity Percentile: 0.00 Registered: 2010-04-23 07:05

5. Sublogo dendrograms - Sublogo dendrograms are statistical graphics that reveal correlation in biological sequence alignments.

Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) (Now Filtering)
Environment : Web Environment [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : PHP [Filter]
Programming Language : R [Filter]
Programming Language : Unix Shell [Filter]
Topic : Bioinformatics : Visualization [Filter]
Topic : Genetics [Filter]
Topic : Graphics : Plotting [Filter]

Registered: 2009-06-19 09:14

6. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD.

Development Status : 4 - Beta [Filter]
Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) (Now Filtering)
Environment : X11 Applications [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : Other/Proprietary License [Filter]
Natural Language : English [Filter]
Operating System : MacOS [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Computational Physics [Filter]
Topic : Connectivity [Filter]
Topic : High Performance Computing : Large Memory [Filter]

Registered: 2009-06-17 16:54

7. sentiment - The sentiment project provides packages to retrieve text corpora from various web sources and analyze its sentiment based on the tm text mining package.

Development Status : 3 - Alpha [Filter]
Environment : Console (Text Based) (Now Filtering)
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : R [Filter]
Topic : Text : Text Mining [Filter]

Activity Percentile: 0.00

Registered: 2011-03-24 20:11

8. Animal Intake Behaviour Analysis Package - POO R package for chronological Intake Behaviour Data analysis from test animals. Manage data and predict normal and irregular behaviour.

Development Status : 3 - Alpha [Filter]
Environment : Console (Text Based) (Now Filtering)
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Natural Language : Spanish [Filter]
Operating System : OS Independent [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : R [Filter]
Topic : Bioinformatics [Filter]
Topic : Biostatistics & Medical Statistics [Filter]
Topic : Time Series [Filter]

Activity Percentile: 0.00

Registered: 2010-08-30 08:56

9. GWAtoolbox - An R-package implemented for genome-wide association studies. The main feature is very vast quality check of data before meta-analysis. It provides an extensive list of quality statistics presented using easy-to-use DHTML and graphical outputs.

Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) (Now Filtering)
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS [Filter]
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Medical Science [Filter]
Topic : Genetics [Filter]

Activity Percentile: 0.00

Registered: 2011-03-23 10:20

10. doSNOW - The doSNOW package provides a parallel backend to the foreach package's %dopar% operator that provides parallel computation via R's snow package.

Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) (Now Filtering)
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS [Filter]
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : R [Filter]
Topic : High Performance Computing : Parallel Computing [Filter]

Activity Percentile: 0.00

Registered: 2010-11-19 22:28

11. mzmatch.R - This package provides integration between the mzMatch/PeakML Java library (and its file formats) and the XCMS library for R. mzMatch is a modular, open source and platform independent data processing pipeline for metabolomics LC/MS data.

Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) (Now Filtering)
Environment : Win32 (MS Windows) [Filter]
Environment : X11 Applications [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Natural Language : Russian [Filter]
Operating System : Microsoft : Windows : Windows Vista [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : Java [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics [Filter]
Topic : Design of Experiments & Analysis of Experimental Data [Filter]

Activity Percentile: 0.00

Registered: 2010-10-20 17:09

12. doSMP - The doSMP package provides a parallel backend to the foreach package's %dopar% operator, allowing parallel operation on a symmetric multiprocessor workstation.

Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) (Now Filtering)
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : High Performance Computing [Filter]

Activity Percentile: 0.00

Registered: 2010-11-19 22:27

13. Composite Likelihood for Random Fields - Composite-Likelihood based methods for Random Fields.

Development Status : 4 - Beta [Filter]
Environment : Console (Text Based) (Now Filtering)
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS [Filter]
Operating System : Microsoft [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Environmetrics [Filter]
Topic : Multivariate Statistics : Multivariate Distributions [Filter]
Topic : Spatial Data & Statistics [Filter]

Activity Percentile: 0.00

Registered: 2010-02-08 16:57

14. R2scheme - Compile R code to binary machine code and dynamically link the binary to R using the bigloo scheme compiler.

Development Status : 2 - Pre-Alpha [Filter]
Environment : Console (Text Based) (Now Filtering)
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS [Filter]
Operating System : Microsoft : Windows : Windows NT/2000/XP [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : Lisp [Filter]
Topic : Software Development : Compilers [Filter]

Activity Percentile: 0.00

Registered: 2010-11-03 09:48

15. Regression Modeling Strategies - Regression modeling, testing, estimation, validation, graphics, prediction, and typesetting by storing enhanced model design attributes in the fit. rms is a collection of 229 functions that assist with and streamline modeling.

Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) (Now Filtering)
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS [Filter]
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : Fortran [Filter]
Programming Language : R [Filter]
Topic : Biostatistics & Medical Statistics [Filter]
Topic : Graphics : Applications [Filter]
Topic : Regression Models [Filter]

Activity Percentile: 0.00

Registered: 2010-11-22 19:09

16. rich - A collection of functions related to species richness estimation and comparison.

Development Status : 3 - Alpha [Filter]
Environment : Console (Text Based) (Now Filtering)
Intended Audience : End Users/Desktop [Filter]
Natural Language : English [Filter]
Operating System : MacOS [Filter]
Operating System : Microsoft : Windows : Windows NT/2000/XP [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : R [Filter]
Topic : Environmetrics [Filter]

Activity Percentile: 0.00

Registered: 2011-01-12 09:06

17. Protocol for Adjust & Select Models - This project is about modeling species abundances in communities.

Development Status : 1 - Planning [Filter]
Development Status : 2 - Pre-Alpha [Filter]
Environment : Console (Text Based) (Now Filtering)
Environment : Win32 (MS Windows) [Filter]
Environment : X11 Applications [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
Intended Audience : Other Audience [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : Microsoft : Windows [Filter]
Operating System : Other OS [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Other/Nonlisted Topic [Filter]

Activity Percentile: 0.00

Registered: 2011-01-18 16:54

18. Genome-wide analysis using MOSS - Performs genome-wide analysis of dense SNP array data using the mode oriented stochastic search (MOSS) algorithm in a case-control design. Includes preprocessing of the data from Plink format to the format required by the MOSS algorithm.

Development Status : 3 - Alpha [Filter]
Environment : Console (Text Based) (Now Filtering)
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : C/C\+\+ [Filter]
Programming Language : Fortran [Filter]
Programming Language : R [Filter]
Topic : Bayesian Statistics [Filter]
Topic : Genetics [Filter]
Topic : Graphical Models [Filter]

Activity Percentile: 0.00

Registered: 2011-01-07 17:53

19. rneos: R interface to NEOS - R package that implements the XML-RPC interface to NEOS (http://www.neos-server.org)

Development Status : 4 - Beta [Filter]
Environment : Console (Text Based) (Now Filtering)
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : BSD License [Filter]
Natural Language : English [Filter]
Operating System : Microsoft : Windows [Filter]
Operating System : OS Independent [Filter]
Operating System : POSIX : Linux (Now Filtering)
Programming Language : R [Filter]
Topic : Connectivity : WWW/HTTP [Filter]
Topic : Finance [Filter]
Topic : Optimization [Filter]

Activity Percentile: 0.00

Registered: 2010-07-16 15:32

83 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>