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67 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model. |
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Registered: 2012-07-03 03:50 |
1. MEET.5.1:Motif Element Estimation Tools - MEET 5.1 is an R-package that includes a set of models, aprox. 550, and tools for the detection of cis-regulatory sequences. |
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- Topic : Bioinformatics : Mathematics [Filter]
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Registered: 2011-08-10 14:27 |
2. Integer and Nonlinear Optimization in R - The project "Integer and Nonlinear Optimization in R (RINO)" provides the packages Rbonmin, Rlago (both interfaces to MINP solvers) and solnp. |
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- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Nonlinear Programming [Filter]
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Registered: 2008-03-14 14:49 |
3. cgen - Parallel Genomic Prediction and GWAS in R using Eigen and Rcpp |
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Registered: 2013-05-29 18:34 |
4. RInside - R inside C++ - RInside provides simple C++ classes that make it easy to embed R into your C++ applications. |
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Registered: 2009-02-08 22:38 |
5. factorplot - factorplot provides numerical and graphical summaries of factor-level differences in GLMs. It produces all pairwise hypotheses tests with either the exact pairwise difference and variance or user-supplied quasi-variances or floating absolute risks. |
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Registered: 2011-05-30 16:43 |
6. Extreme Values in R (evir) - Extreme Value in R: Functions for extreme value theory, which may be divided into the following groups; exploratory data analysis, block maxima, peaks over thresholds (univariate and bivariate), point processes, gev/gpd distributions. |
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- Topic : Econometrics : Time Series Modelling [Filter]
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- Topic : Time Series [Filter]
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Registered: 2011-03-21 13:20 |
7. Analysis of phenological digital imagery - The package phenopix provides functions to process digital images of a vegetation cover, depict greennes index trajectories and extract relevant phenological stages. |
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- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2014-09-23 08:50 |
8. netbenchmark - The development version of netbenchmark package, which implements a benchmarking of several gene network inference algorithms from gene expression data. |
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Registered: 2014-11-28 09:55 |
9. Linear quantile mixed models - This project is aimed at developing an R package to fit and analyse quantile regression models with random effects. |
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Registered: 2012-05-15 16:23 |
10. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association. |
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Registered: 2012-08-10 08:48 |
11. rPithon: use Python over a 'pipe' - rPithon is based on rPython but instead of linking to the Python libraries, a Python program is started and is communicated with using a 'pipe'. This allows different R programs/packages to use different Python instances if desired. |
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Registered: 2014-12-24 12:43 |
12. readcsvcolumns - This package provides a single R function called read.csv.columns with which you can read a CSV file. You also need to specify beforehand what type each column is (integers, real values or strings) and you can also mark columns to be ignored. |
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Registered: 2014-12-31 12:19 |
13. Composite Likelihood for Random Fields - Composite-Likelihood based methods for Random Fields. |
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- Topic : Multivariate Statistics : Multivariate Distributions [Filter]
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Registered: 2010-02-08 16:57 |
14. Dave Armstrong's Misc Functions - Package contains functions to aid in the presentation and interpretation of GLMs and related models. These include utilities to help deal with present interactions in linear and logit/probit models, first differences in predicted probabilities, etc... |
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- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
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Registered: 2012-05-07 16:37 |
15. Symphony in R - An R interface to the SYMPHONY MILP solver. |
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- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
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Registered: 2007-12-17 15:44 |
16. NDVI Time Series extraction and analysis - The routines extract automatically NDVI time series from different satellites (AVHRR, Spot Vegetation, MODIS) and provide tools to display and analyze them. Phenological metrics can be computed for every season as well as vegetation anomaly maps. |
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Registered: 2011-06-23 07:05 |
17. RootTreeToR - !! NOTE - THIS AREA IS NO LONGER UPDATED. See https://cdcvs.fnal.gov/redmine/projects/roottreetor INSTEAD. |
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- Topic : Computational Physics [Filter]
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Registered: 2009-06-17 16:54 |
18. mrp - MOVED TO GITHUB: https://github.com/malecki/mrp |
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Registered: 2009-09-21 14:11 |
19. Analysis of multi-electrode array data - Functions for the analysis of spike-trains recorded using multi-electrode arrays. Tools include simple visualisation, movie generation, burst analysis, network spikes and episode detection. |
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Registered: 2012-04-07 09:14 |
67 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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