Software Map
Project Tree
Now limiting view to projects in the following categories:
Topic :: Genetics :: Linkage, LD and Haplotype Mapping [Remove This Filter]
8 projects in result set.
0. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition. |
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping (Now Filtering)
|
Registered: 2013-01-21 21:13 |
1. GenABEL - A suite of packages for statistical genomics |
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping (Now Filtering)
|
Registered: 2009-08-12 17:07 |
2. Eagle for Genome-Wide Association Mappin - The Eagle package is an implementation of multiple-locus association mapping on a genome-wide scale. It can handle inbred or outbred study populations, populations of arbitrary unknown complexity, and data larger than the memory capacity of the computer. |
- Development Status : 1 - Planning [Filter]
- Environment : Web Environment [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Programming Language : R [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping (Now Filtering)
- Topic : Genetics : QTL Mapping [Filter]
- Topic : High Performance Computing : Parallel Computing [Filter]
|
Activity Percentile: 0.00
Registered: 2017-07-24 00:36 |
3. Polyphase - This method accepts the genotype data, the relative physical position of the markers for species of any ploidy and returns the phased output. |
- Development Status : 3 - Alpha [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : C/C\+\+ [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2016-02-18 15:57 |
4. The FEST package - Identification of Family Relations using linked markers. |
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Programming Language : Perl [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2010-04-13 13:05 |
5. polyploid - We provide tools for polyploid data, covering topics from genotype calling, over linkage mapping to haplotyping. Further we allow users to simulate own data sets for given genotypes and population structures. |
- Development Status : 2 - Pre-Alpha [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : POSIX : Linux [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2014-02-05 10:27 |
6. NlsyLinks - Utilities and kinship information for Behavior Genetics research using the NLSY. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : OS Independent [Filter]
- Programming Language : R [Filter]
- Topic : Datasets [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping (Now Filtering)
|
Activity Percentile: 0.00
Registered: 2012-01-20 03:30 |
7. GeneticMediation - GeneticMediation provides methods for conducting causal mediation analysis on data from the ROSMAP study. It also provides methods for cleaning, matching, and preparing the data for analysis. |
- Development Status : 5 - Production/Stable [Filter]
- Intended Audience : Developers [Filter]
- Intended Audience : End Users/Desktop [Filter]
- License : OSI Approved : GNU General Public License (GPL) [Filter]
- Natural Language : English [Filter]
- Operating System : MacOS [Filter]
- Operating System : Microsoft : Windows [Filter]
- Programming Language : R [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : Linkage, LD and Haplotype Mapping (Now Filtering)
- Topic : Genetics : Population Genetics [Filter]
|
Activity Percentile: 0.00
Registered: 2020-04-25 19:28 |