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48 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor. | |
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Activity Percentile: 0.00 Registered: 2010-04-01 17:54 |
1. pi0 estimators - Estimation of the proportion of true null hypotheses (pi0) from a large number of hypothesis tests; Non/parametric recovery of noncentrality parameter distribution; False discovary rates (FDR) computation. | |
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Activity Percentile: 0.00 Registered: 2010-03-21 02:01 |
2. therese - The purpose of this package is to propose a method for inferring networks from expression data obtained in various experimental condition. The "cLasso" (consensus Lasso) method is implemented. | |
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Activity Percentile: 0.00 Registered: 2013-07-05 08:44 |
3. netmes - Netmes is an R software package that allows assessing the Gene Regulatory Network Inference (GRNI) algorithms in detail by using several local and global network-based error measures in combination with an ensemble approach. | |
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Activity Percentile: 0.00 Registered: 2013-07-26 14:26 |
4. cvrcalc - A Cardiovascular Risk's Calculator by Scores | |
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Activity Percentile: 0.00 Registered: 2013-08-02 12:18 |
5. Quasi-likelihood parameter estimation - The package provides methods for parameter estimation for statistical models that can be simulated. We follow a quasi-likelihood approach to estimate the unknown parameter by the root of the so-called quasi-score estimating function. | |
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Activity Percentile: 0.00 Registered: 2017-08-30 21:22 |
6. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486. | |
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Activity Percentile: 0.00 Registered: 2013-11-21 21:46 |
7. OOMPA - OOMPA is a suite of R packages for the analysis of gene expression (RNA), proteomics profiling , and other high throughput molecular biology data. OOMPA uses S4 classes to construct object-oriented tools with a consistent user interface. | |
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Activity Percentile: 0.00 Registered: 2013-08-29 17:48 |
8. UMPIRE - UMPIRE provides tools to simulate realistic biological expression data. It includes additive and multiplicative noise, correlated expression, inactive genes, and a link to outcome data that incorporates the multi-hit cancer model. | |
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Activity Percentile: 0.00 Registered: 2014-02-03 16:37 |
9. Class Prediction - A suite of packages that can bu used for "class prediction" problems. Includes tools to standardize training-testing regimens and cross-validation schemes. | |
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Activity Percentile: 0.00 Registered: 2014-02-03 16:15 |
10. MeDiChI - R package implementing model based deconvolution of ChIP-chip (transcription factor binding) data, as published in Bioinformatics journal.
Please visit http://baliga.systemsbiology.net/medichi for source code, instructions, and R package downloads. | |
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Registered: 2010-05-14 17:13 |
11. waveTiling - Perform transcriptome analysis from tiling array data by a wavelet-based functional model. | |
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Activity Percentile: 0.00 Registered: 2011-12-05 20:42 |
12. smoothtest - This package implements a whole series of smooth tests that serve as goodness of fit tests for univariate data against a whole range of distributions. The tests can be performed both parametric and data driven. | |
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Activity Percentile: 0.00 Registered: 2011-11-29 13:02 |
13. modEvA - modEvA is an R package for species distribution model evaluation and analysis. | |
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Activity Percentile: 0.00 Registered: 2014-04-04 11:51 |
14. The forensim package - The forensim package for the R environment provides statistical tools dedicated to the interpretation of forensic DNA mixtures | |
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Activity Percentile: 0.00 Registered: 2009-04-17 15:10 |
15. synbreed - Collection of statistical and genetic methods developed for the synbreed project for synergistic plant and animal breeding.
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Activity Percentile: 0.00 Registered: 2010-03-05 10:51 |
16. GADA - GADA is an R package for fast and accurate method for detecting copy number alterations (CNA) from array data.
http://groups.google.com/group/gadaproject | |
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Activity Percentile: 0.00 Registered: 2010-10-09 02:03 |
17. CENTIPEDE - CENTIPEDE is a probabilistic framework that integrates tissue-specific experimental data such as histone modifications and DNaseI cleavage patterns with genomic information such as gene annotation and evolutionary
conservation. | |
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Activity Percentile: 0.00 Registered: 2010-10-26 14:24 |
18. ParallABEL - ParallABEL aims to speed up the computation of GWA studies and also simplify parallelization in analysis of this important research area.
See http://www.sc.psu.ac.th/units/genome/CGBR/ParallABEL/index.html for more details. | |
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Activity Percentile: 0.00 Registered: 2010-04-23 07:05 |
19. Range Correlations - Methods from spatial statistics are adapted and implemented to be used for assessing marginal and partial correlations in range and site data (positional data) along genomes based on the Bioconductor package GenomicRanges. | |
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Activity Percentile: 0.00 Registered: 2011-03-07 18:54 |
48 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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