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45 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. renjin - Renjin is ongoing project to implement a new interpreter for the R language that runs within the Java Virtual Machine, and specifically on the Google AppEngine platform |
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Registered: 2010-12-14 19:46 |
1. Genome-wide analysis using MOSS - Performs genome-wide analysis of dense SNP array data using the mode oriented stochastic search (MOSS) algorithm in a case-control design. Includes preprocessing of the data from Plink format to the format required by the MOSS algorithm. |
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- Topic : Bayesian Statistics [Filter]
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- Topic : Graphical Models [Filter]
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Registered: 2011-01-07 17:53 |
2. Quantitative Fitness Analysis - QFA is an experimental and computational methodology for estimation of the fitnesses of arrayed microbial cultures growing on solid agar. Methods for estimating fitnesses, fitness variability and genetic interaction strengths are included. |
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- Topic : Bayesian Statistics : General Model Fitting [Filter]
- Topic : Bioinformatics : Mathematics [Filter]
- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2010-09-06 17:05 |
3. Phylobase Extension - This package provides classes and methods which help read/write/manipulate branch-annotated phylogenetic trees (SIMMAP-format) and supports for a few other extra phylogenetic tree features (like tree weight).
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- Topic : Genetics : Phylogenetics [Filter]
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Registered: 2011-04-26 02:20 |
4. Quadratic programming modeling language - An intuitive modeling language for quadratic programs, and functions to generate the standard form matrices required to use solve.QP(). |
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- Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]
- Topic : Software Development : Code Generators [Filter]
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Registered: 2011-04-22 14:44 |
5. RevoExts - RevoExts is a project for open-source, third-party packages extending Revolution Analytics' RevoScaleR. |
- Development Status : 2 - Pre-Alpha [Filter]
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Registered: 2011-05-09 17:31 |
6. ggcluster - plot cluster data w/ ggplot2 - Tools for creating cluster plots, tree plots and dendrograms using ggplot.
ggcluster provides a convenient, generic extractor function that can handle dendrogram, tree, kmeans, hclust and Mclust objects. |
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Registered: 2011-07-13 08:40 |
7. phrapl - Note: development of phrapl has moved to GitHub: https://github.com/bomeara/phrapl |
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- Topic : Genetics : Phylogenetics [Filter]
- Topic : Genetics : Population Genetics [Filter]
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Registered: 2011-06-14 14:51 |
8. Analysis of Independent Contrasts - The CAIC package provides methods for the comparative analysis of taxa using independent contrasts methods. It reimplements the methods of the CAIC and MacroCAIC programs will implement alternative methods such as those provided in LDAP. |
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Registered: 2008-01-31 15:29 |
9. Bias reduction in GLMs - brglm provides brglm.fit which is an alternative method to glm.fit that works under the usual glm interface.
Estimation is either by correcting the bias of the maximum likelihood estimates or using an adjusted-score approach to improving bias. |
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- Topic : Regression Models [Filter]
- Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
- Topic : Social Sciences : Linear and Generalized Linear Models [Filter]
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Registered: 2011-08-20 14:19 |
10. SynergizeR - This package provides programmatic access to The Synergizer service for translating between sets of biological identifiers. |
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- Topic : Bioinformatics : Medical Science [Filter]
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Registered: 2011-11-04 17:46 |
11. SPecies' LImits by Threshold Statistics - splits contains tools for delimiting species and automated taxonomy at many levels of biological organization (eg. DNA barcoding, morphometrics), top-down (merging phylogenetic and phylogeographic methods) and bottom-up (single samples into >1 groups). |
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- Topic : Cluster Analysis : Other Cluster Algorithms [Filter]
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Registered: 2009-01-15 14:06 |
12. Universal log-optimal portfolios - Provide implementation of universal log-optimal portfolio algorithms in the tradition started by Thomas Cover in "Universal Portfolios". |
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- Topic : Finance [Filter]
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Registered: 2010-10-26 02:55 |
13. quantmod: financial modelling - Designed to bring fast, full, and extensible access of R statistical tools to the quantitative developer.
This project has moved from R-Forge to GitHub:
https://github.com/joshuaulrich/quantmod |
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- Programming Language : Fortran [Filter]
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- Topic : Econometrics [Filter]
- Topic : Finance : Data and Date Management [Filter]
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Registered: 2008-01-10 19:53 |
14. Plot manageable subsets of data - Plotting a large data set is difficult if it does not fit into memory as a data frame, so we introduce more efficient data structures and alternative plot functions that work with large data. |
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- Programming Language : PL/SQL [Filter]
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- Topic : Database [Filter]
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- Topic : High Performance Computing : Large Memory [Filter]
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Registered: 2009-09-29 11:02 |
15. Rshare: the shared environment package - The Rshare package allows for a version of interprocess communication between separate R processes. This is facilitated through a shared environment hosted in one R session to which other R processes may subscribe. |
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- Topic : Connectivity [Filter]
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Registered: 2012-07-03 04:36 |
16. Diagnostic and prognostic meta-analysis - This package provides functions for diagnostic and prognostic meta-analyses. It estimates univariate, bivariate and multivariate models, and allows the aggregation of previously published prediction models with new data. |
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- Topic : Biostatistics & Medical Statistics [Filter]
- Topic : Multivariate Statistics [Filter]
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Registered: 2012-08-09 13:01 |
17. sampSurf - Sampling surface simulation - This package will allow the estimation of sampling surfaces over a spatial extent for use in assessing different areal sampling methods used in forestry and ecology. |
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2010-11-24 18:59 |
18. Yield Curve - Yield curve is modelled by the methodologies of Nelson-Siegel and Svensson. The crucial point is to estimate the coefficients in linear way, according to approach of Diebol and Li.
The package also includes the term structure of Fed and ECB. |
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Registered: 2009-07-26 15:06 |
19. Raster Time Series - This package aims to provide classes and methods for manipulating and processing of raster time series data (e.g. a time series of satellite images). |
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- Topic : Spatial Data & Statistics : Classes for Spatial Data [Filter]
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- Topic : Time Series [Filter]
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Registered: 2012-07-07 21:08 |
45 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>