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36 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. crop - The package crop provides an interface to system tools (on Unix-like operating systems) to crop graphics. |
- Development Status : 4 - Beta [Filter]
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Registered: 2015-10-18 18:40 |
1. ddepn - DDEPN (Dynamic Deterministic Effects Propagation Networks): Infer signalling networks for high-throughput genomic or proteomic timecourse data, generated after external perturbation like activation or inhibition of network nodes. |
- Development Status : 5 - Production/Stable [Filter]
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Registered: 2011-06-10 12:24 |
2. genoPlotR - plot gene and genome maps - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files. |
- Development Status : 5 - Production/Stable [Filter]
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Registered: 2010-01-08 16:59 |
3. Bayesian Biclustering - This package uses a Bayesian spike-and-slab model to construct bidendrograms using log posterior as the natural distance defined by the model and calculates importance using log Bayes factor. |
- Development Status : 4 - Beta [Filter]
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- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Cluster Analysis : Model-based Clustering [Filter]
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Registered: 2010-04-01 17:54 |
4. STOPS - Methods that fit nonlinear distance transformations in multidimensional scaling and trade-off the fit with structure considerations to find optimal parameters. |
- Development Status : 3 - Alpha [Filter]
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- Topic : Multivariate Statistics : Principal Coordinates / Scaling Methods [Filter]
- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
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Registered: 2015-02-12 00:09 |
5. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition. |
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- Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]
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Registered: 2013-01-21 21:13 |
6. rGEDI - rGEDI: NASA's Global Ecosystem Dynamics Investigation (GEDI) Data Visualization and Processing |
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2020-03-12 20:57 |
7. Mixed-pair mutual information estimators - Fast calculation mutual information for comparisons between all types of variables including continuous vs continuous, continuous vs discrete and discrete vs discrete. Also provides jackknife bias correction and tests for association. |
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Registered: 2012-08-10 08:48 |
8. Species Abundance Distributions - Tools to fit and compare models of species abundance distribution using likelihood-based methods |
- Development Status : 1 - Planning [Filter]
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- Topic : Environmetrics [Filter]
- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2011-01-24 12:50 |
9. Monte Carlo IBD Matrix Estimation - Flexible Monte Carlo Identity-By-Descent (IBD) Matrix Estimation with Within-Line Segregation for Use of Quantitative Trait Loci (QTL) Detection in F2 Intercross Designs. |
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- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : QTL Mapping [Filter]
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Registered: 2009-10-07 19:54 |
10. Variant Pattern Analyzer - VPA (Variant Pattern Analyzer) is an R package for prioritizing variants with user-specified frequency pattern from multiple study subjects in next generation sequencing study. |
- Development Status : 4 - Beta [Filter]
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Registered: 2011-08-05 14:30 |
11. Hadoop Streaming - Provides a framework for writing map/reduce scripts for use in Hadoop Streaming. Also facilitates operating on data in a streaming fashion, without Hadoop. |
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Registered: 2009-03-19 14:46 |
12. calibFit - This package provides curve fitting, visualization, and calibration methods for the development, validation, and use of biological and chemical assays. The functionality includes heteroscedasticity, model selection, and measures of assay quality. |
- Development Status : 6 - Mature [Filter]
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- Topic : Design of Experiments & Analysis of Experimental Data [Filter]
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- Topic : Regression Models [Filter]
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Registered: 2011-10-25 17:59 |
13. Regression Modeling Strategies - Regression modeling, testing, estimation, validation, graphics, prediction, and typesetting by storing enhanced model design attributes in the fit. rms is a collection of 229 functions that assist with and streamline modeling. |
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- Topic : Biostatistics & Medical Statistics [Filter]
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- Topic : Regression Models [Filter]
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Registered: 2010-11-22 19:09 |
14. cardidates - Peaks in Environm. Series - cardidates: Methods for Peak Identification in Environmental Time Series |
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Registered: 2008-12-12 11:07 |
15. Soil water - The project has now moved to GitHub: https://github.com/julienmoeys/soilwater |
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Registered: 2010-08-17 21:13 |
16. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering. |
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- Topic : Machine Learning : Bayesian Methods [Filter]
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Registered: 2009-02-18 09:38 |
17. The Soil Texture Wizard - The project has now moved to GitHub: https://github.com/julienmoeys/soiltexture |
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Registered: 2010-04-08 12:28 |
18. Tools for Uplift Modeling - The R Package tools4uplift integrates some tools for exploring and modeling uplift. The content can be separated into the following steps of statistical modeling: quantization, visualization, model selection and model validation. |
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Registered: 2018-08-31 21:23 |
19. R2scheme - Compile R code to binary machine code and dynamically link the binary to R using the bigloo scheme compiler. |
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Registered: 2010-11-03 09:48 |
36 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>