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121 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. STOPS - Methods that fit nonlinear distance transformations in multidimensional scaling and trade-off the fit with structure considerations to find optimal parameters.

Development Status : 3 - Alpha [Filter]
Environment : Console (Text Based) [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS (Now Filtering)
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux [Filter]
Programming Language : R [Filter]
Topic : Cluster Analysis : Hierarchical Clustering [Filter]
Topic : Multivariate Statistics : Principal Coordinates / Scaling Methods [Filter]
Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]

Activity Percentile: 61.11

Registered: 2015-02-12 00:09

1. BayesSurv - This package estimates mortality with covariates from capture-recapture/recovery data in a Bayesian framework when many individuals are of unknown age. It includes tools for data checking, model diagnostics and outputs such as life-tables and plots.

Development Status : 3 - Alpha [Filter]
Environment : Console (Text Based) [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS (Now Filtering)
Operating System : Microsoft [Filter]
Operating System : Other OS [Filter]
Programming Language : R [Filter]
Topic : Bayesian Statistics : Specific Model Fitting [Filter]

Activity Percentile: 0.00

Registered: 2011-06-08 10:38

2. OUwie - Calculates and compares rate differences of continuous character evolution under Brownian motion and a new set of Ornstein-Uhlenbeck (OU) models that allow the strength of selection and drift to vary across selective regimes.

Development Status : 4 - Beta [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS (Now Filtering)
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux [Filter]
Programming Language : R [Filter]
Topic : Genetics : Phylogenetics [Filter]
Topic : Spatial Data & Statistics : Ecological Analysis [Filter]

Activity Percentile: 0.00

Registered: 2011-07-13 13:38

3. species delimitation in oysters - The aim of this project is to make clear oyster phylogeny and systematics using both the MrBayes and the BEAST/GMYC analyses based on multigene sequence data.
Intended Audience : End Users/Desktop [Filter] Natural Language : Japanese [Filter] Operating System : MacOS (Now Filtering) Operating System : Microsoft : Windows [Filter] Topic : Bayesian Statistics [Filter]	Activity Percentile: 0.00 Registered: 2012-05-02 12:23

4. move: analyze animal movement data - move is a package that contains functions to access movement data stored in movebank.org as well as tools to visualize and statistically analyse animal movement data. Move addresses movement ecological questions.

Development Status : 4 - Beta [Filter]
Environment : Console (Text Based) [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Natural Language : German [Filter]
Operating System : MacOS (Now Filtering)
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux [Filter]
Programming Language : C/C\+\+ [Filter]
Programming Language : Fortran [Filter]
Programming Language : R [Filter]
Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
Topic : Spatial Data & Statistics : Point Pattern Analysis [Filter]

Activity Percentile: 0.00

Registered: 2012-03-28 07:52

5. WaveSeqR - Public repository of R-package WaveSeqR which implements the ChIP-Seq analysis algorithm WaveSeq DOI: 10.1371/journal.pone.0045486.

Development Status : 4 - Beta [Filter]
Environment : Console (Text Based) [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS (Now Filtering)
Operating System : POSIX : Linux [Filter]
Programming Language : Perl [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Statistics [Filter]
Topic : Biostatistics & Medical Statistics [Filter]

Activity Percentile: 0.00

Registered: 2013-11-21 21:46

6. parallelstructure - Package to provide a R framework to make use of multi-core computers when running analysis in the population genetics software STRUCTURE.

Development Status : 4 - Beta [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS (Now Filtering)
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Operating System : POSIX : Linux [Filter]
Programming Language : R [Filter]
Topic : Genetics : Population Genetics [Filter]
Topic : High Performance Computing : Parallel Computing [Filter]

Activity Percentile: 0.00

Registered: 2013-03-26 16:28

7. FNTD - Routines to analyze images from Al2O3:C,Mg-based fluorescent nuclear track detectors in ion-beam research. As from 9/17(15, the development has moved to github (https://github.com/FNTD) & R-forge is updated with (relatively) stable versions.

Development Status : 3 - Alpha [Filter]
Environment : Console (Text Based) [Filter]
Intended Audience : Developers [Filter]
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License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
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Programming Language : C/C\+\+ [Filter]
Programming Language : Java [Filter]
Programming Language : R [Filter]
Topic : Computational Physics [Filter]

Activity Percentile: 0.00

Registered: 2014-07-04 07:57

8. Bayesian Estimation and Model Checking - This package mainly deals with generalized linear spatial models in Bayesian way for estimation, prediction and model checking.

Development Status : 4 - Beta [Filter]
Environment : Console (Text Based) [Filter]
Environment : X11 Applications : Gnome [Filter]
Intended Audience : Developers [Filter]
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Intended Audience : Other Audience [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS (Now Filtering)
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux [Filter]
Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Bayesian Statistics [Filter]
Topic : Multivariate Statistics [Filter]
Topic : Spatial Data & Statistics : Geostatistics [Filter]

Activity Percentile: 0.00

Registered: 2011-08-18 03:20

9. ROI - R Optimization Infrastructure - The project ROI offers an infrastructure package for optimization. Its aim is to facilitate the usage of different mixed integer programming (MIP) solvers by providing a single interface.

Development Status : 1 - Planning [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Natural Language : German [Filter]
Operating System : MacOS (Now Filtering)
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux [Filter]
Programming Language : R [Filter]
Topic : Optimization : Mathematical Programming [Filter]

Activity Percentile: 0.00

Registered: 2008-11-25 11:36

10. labeltodendro - This package converts labels to a dendrogram and can be used to summarize groupings achieved by Markov chain Monte Carlo clustering.

Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS (Now Filtering)
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux [Filter]
Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Visualization [Filter]
Topic : Cluster Analysis : Model-based Clustering [Filter]
Topic : Machine Learning : Bayesian Methods [Filter]

Activity Percentile: 0.00

Registered: 2009-02-18 09:38

11. R package nlstools - The R package nlstools: a toolbox for nonlinear regression diagnostics

Development Status : 5 - Production/Stable [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
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Operating System : POSIX : Linux [Filter]
Programming Language : R [Filter]
Topic : Regression Models [Filter]

Activity Percentile: 0.00

Registered: 2009-02-24 11:54

12. Testing HWE for Multiallelic Genes - This package calculates plain and fully conditional P-values for the root-mean-square statistic, chi-square statistic, and log likelihood-ratio statistic for the user-provided genotype counts to be consistent with the Hardy-Weinberg equilibrium model.

Development Status : 4 - Beta [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
Intended Audience : Other Audience [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS (Now Filtering)
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics : Statistics [Filter]

Activity Percentile: 0.00

Registered: 2012-07-03 03:50

13. Extremal Dependence - Extremal Dependence package provides parametric and nonparametric statistical methods for modelling and estimating the dependence of extreme values

Development Status : 5 - Production/Stable [Filter]
Environment : Console (Text Based) [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
Natural Language : English [Filter]
Operating System : MacOS (Now Filtering)
Operating System : Microsoft [Filter]
Operating System : POSIX : Linux [Filter]
Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
Topic : Spatial Data & Statistics : Geostatistics [Filter]

Activity Percentile: 0.00

Registered: 2014-12-02 11:09

14. LDExplorer - LDExplorer is an R package for the memory and time efficient whole-genome LD based haplotype block recognition.

Environment : Console (Text Based) [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS (Now Filtering)
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux [Filter]
Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Bioinformatics [Filter]
Topic : Genetics : Linkage, LD and Haplotype Mapping [Filter]

Registered: 2013-01-21 21:13

15. Dave Armstrong's Misc Functions - Package contains functions to aid in the presentation and interpretation of GLMs and related models. These include utilities to help deal with present interactions in linear and logit/probit models, first differences in predicted probabilities, etc...

Development Status : 4 - Beta [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS (Now Filtering)
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux [Filter]
Programming Language : R [Filter]
Topic : Regression Models [Filter]
Topic : Social Sciences : Analysis of Categorical and Count Data [Filter]
Topic : Social Sciences : Linear and Generalized Linear Models [Filter]

Activity Percentile: 0.00

Registered: 2012-05-07 16:37

16. CorReg - find a structure explaining correlations between covariates and use it to compute linear regression. It provides an efficient new estimator for recursive SEM.

Development Status : 4 - Beta [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
Natural Language : English [Filter]
Natural Language : French [Filter]
Operating System : MacOS (Now Filtering)
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux [Filter]
Programming Language : C/C\+\+ [Filter]
Programming Language : R [Filter]
Topic : Econometrics : Linear Regression Models [Filter]
Topic : Regression Models [Filter]
Topic : Robust Statistics [Filter]

Activity Percentile: 0.00

Registered: 2013-11-14 14:32

17. Phylobase Extension - This package provides classes and methods which help read/write/manipulate branch-annotated phylogenetic trees (SIMMAP-format) and supports for a few other extra phylogenetic tree features (like tree weight).

Development Status : 3 - Alpha [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS (Now Filtering)
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX [Filter]
Programming Language : R [Filter]
Topic : Genetics : Phylogenetics [Filter]

Activity Percentile: 0.00

Registered: 2011-04-26 02:20

18. d/p/q/r functions of Coxian distribution - The package provides the d/p/q/r functions of a Coxian distribution.

Development Status : 1 - Planning [Filter]
Environment : Console (Text Based) [Filter]
Intended Audience : End Users/Desktop [Filter]
License : Public Domain [Filter]
Natural Language : English [Filter]
Operating System : MacOS (Now Filtering)
Operating System : Microsoft : Windows [Filter]
Operating System : POSIX : Linux [Filter]
Programming Language : R [Filter]
Topic : High Performance Computing [Filter]
Topic : Multivariate Statistics : Modelling Non-Gaussian Data [Filter]
Topic : Other/Nonlisted Topic [Filter]

Activity Percentile: 0.00

Registered: 2016-12-08 01:53

19. Summarizing Data with Graphs - Summarizing Data with Graphs

Development Status : 2 - Pre-Alpha [Filter]
Intended Audience : Developers [Filter]
Intended Audience : End Users/Desktop [Filter]
License : OSI Approved : GNU General Public License (GPL) [Filter]
Natural Language : English [Filter]
Operating System : MacOS (Now Filtering)
Operating System : Microsoft [Filter]
Operating System : POSIX [Filter]
Programming Language : R [Filter]
Topic : Graphical Models [Filter]
Topic : Graphics : Plotting [Filter]

Activity Percentile: 0.00

Registered: 2009-01-19 07:50

121 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>