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45 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
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0. mvtnorm: Multivariate normal and t Distr - Computes multivariate normal and t probabilities, quantiles, random deviates and densities.
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- Topic : Multivariate Statistics : Multivariate Distributions [Filter]
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Activity Percentile: 76.47
Registered: 2008-04-03 21:30 |
1. OriGen - This package implements methods for spatial ancestry described in the paper "Fast Spatial Ancestry via Flexible Allele Frequency Surfaces" published in Bioinformatics 2014.
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- Topic : Genetics : Population Genetics [Filter]
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Registered: 2014-08-26 19:51 |
2. Evolution simulation and classification - After measuring gene frequencies of modern populations that have a common ancestor, we estimate ancestral allele frequency and selection state for each gene. A bayesian model is used and verified using the included simulator.
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- Development Status : 4 - Beta [Filter]
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- Natural Language : French [Filter]
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- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Bioinformatics : Statistics [Filter]
- Topic : Genetics : Population Genetics [Filter]
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Registered: 2009-07-30 17:27 |
3. Local Depth - The package "localdepth" contains functions for the evaluation of some Depth functions and their corresponding local versions, namely Local Depths. Simplicial, Ellipsoid and Mahalanobis Depths are implemented for general dimension.
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- Development Status : 2 - Pre-Alpha [Filter]
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- Topic : Cluster Analysis : Hierarchical Clustering [Filter]
- Topic : Multivariate Statistics [Filter]
- Topic : Robust Statistics [Filter]
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Registered: 2008-09-16 15:34 |
4. Genome-wide analysis using MOSS - Performs genome-wide analysis of dense SNP array data using the mode oriented stochastic search (MOSS) algorithm in a case-control design. Includes preprocessing of the data from Plink format to the format required by the MOSS algorithm.
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- Development Status : 3 - Alpha [Filter]
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- Topic : Bayesian Statistics [Filter]
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- Topic : Graphical Models [Filter]
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Registered: 2011-01-07 17:53 |
5. libamtrack - This package is the R interface to the open-source, ANSI C library libamtrack (http://libamtrack.dkfz.org). It provides computational routines for research in proton and ion beam therapy.
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- Topic : Computational Physics [Filter]
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Registered: 2014-06-28 12:14 |
6. vegan - Community Ecology Package - 'vegan' is a CRAN package for the analysis of ecological communities. It has tools for analysing ecological diversity, and for the multivariate analysis of communities (NMDS, pCCA, pRDA etc.) - Development on R-Forge discontinued, go to https://github.com/vegandevs/
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- Topic : Environmetrics [Filter]
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- Topic : Spatial Data & Statistics : Ecological Analysis [Filter]
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Registered: 2007-09-05 13:59 |
7. randomForest - randomForest provides an R interface to the classification and regression algorithm proposed by Leo Breiman.
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- Topic : Machine Learning : Random Forests [Filter]
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Registered: 2009-09-14 13:01 |
8. Optimist - This project will comprise different approaches in global and discrete optimization, e.g. a simple evolutionary algorithm for global problems, some 'knapsack' procedures and discrete optimization routines, and a collection of optimization test routines.
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- Topic : Numerical Analysis [Filter]
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- Topic : Time Series [Filter]
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Activity Percentile: 0.00
Registered: 2011-03-14 17:35 |
9. Gradient forest - Detecting biological composition patterns along environmental gradients from site-by-species ecological data. Package gradientForest calculates the gradients from split-point importances provided by auxiliary package extendedForest, based on randomForest.
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Activity Percentile: 0.00
Registered: 2011-01-06 08:05 |
10. related - Genetic relatedness in R - An R package that allows users to estimate pairwise relatedness of individuals based on codominant molecular markers, and also has simulation functions for comparing the performance of different estimators and for testing the resolution of a data set.
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- Topic : Genetics : Population Genetics [Filter]
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Registered: 2014-04-09 08:33 |
11. Food web models and statistics - foodweb: model generation and statistical probes for food webs
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Registered: 2011-08-27 09:27 |
12. frontier: Stochastic Frontier Analysis - Maximum Likelihood Estimation of Stochastic Frontier Production and Cost Functions. Two specifications are available: the error components model (Battese and Coelli, 1992) and the efficiency effects model (Battese and Coelli, 1995).
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- Topic : Econometrics : Further Regression Models [Filter]
- Topic : Econometrics : Microeconometrics [Filter]
- Topic : Regression Models [Filter]
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Registered: 2008-10-19 20:27 |
13. DierckxSpline - This package contains wrappers for Dierckx FITPACK routines for splines. These include univariate smoothing and least-squares splines.
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- Development Status : 3 - Alpha [Filter]
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- Topic : Regression Models [Filter]
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Registered: 2007-09-07 17:22 |
14. rwrf - A collection of R post processing utilities for WRF (Weather Research & Forecasting Model).
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- Topic : Spatial Data & Statistics : Classes for Spatial Data [Filter]
- Topic : Spatial Data & Statistics : Reading and Writing Spatial Data [Filter]
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Activity Percentile: 0.00
Registered: 2009-11-17 11:37 |
15. deSolve: Differential Equation Solvers - deSolve is a collection of solvers, mostly from the 'lsode' family of solvers. deSolve provides R interfaces to solvers for stiff and non-stiff systems, and can take system descriptions in R, or as defined in dynamically loaded compiled code.
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- Topic : Numerical Analysis : Numerical Problems in Dynamical Systems [Filter]
- Topic : Numerical Analysis : Ordinary Differential Equations [Filter]
- Topic : Numerical Analysis : Partial Differential Equations [Filter]
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Activity Percentile: 0.00
Registered: 2008-03-26 19:38 |
16. Plant modelling with Yplant - QuasiMC - <<<< This is an old repository and is no longer used. The new home for YplantQMC is www.bitbucket.org/remkoduursma/yplantqmc >>>>
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Registered: 2012-06-04 23:07 |
17. Rwave: time-frequency analysis in 1-D - Rwave is a library of R functions which provide an environment for the time-frequency analysis of 1-D signals. It was originally written for Splus by Rene Carmona, Bruno Torresani, and Wen L. Hwang.
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- Topic : Econometrics : Time Series Modelling [Filter]
- Topic : Finance : Time Series [Filter]
- Topic : Time Series [Filter]
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Registered: 2009-05-27 13:22 |
18. seriation - Infrastructure for seriation - Infrastructure for seriation with an implementation of several seriation/sequencing techniques to reorder matrices, dissimilarity matrices, and dendrograms. Seriation is now maintained on githup at http://github.com/mhahsler/seriation
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- Topic : Multivariate Statistics : Visualising Multivariate Data [Filter]
- Topic : Optimization : Mathematical Programming : Global Optimization [Filter]
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Registered: 2008-02-01 22:32 |
19. ICES WGNSSK functions - plot and display 2 dimensional fishery stock assessment data for use in ICES WGNSSK
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- Topic : Graphics : Plotting [Filter]
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Activity Percentile: 0.00
Registered: 2009-04-30 10:41 |
45 projects in result set. Displaying 20 per page. Projects sorted by activity ranking.
<1>
