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19 projects in result set.
0. CellMix - Resources for performing gene expression deconvolution in R, i.e. estimating cell proportions and/or cell-specific gene expression from global gene expression measured in heterogeneous samples.
Currently hosted packages: csSAM and CellMix packages. |
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Registered: 2013-04-11 08:27 |
1. Belief Propagation - This project seeks to implement generic belief propagation in order to do efficient on graphical models. It will also allow for optimizations using parallel computing and efficient memory management. |
- Development Status : 2 - Pre-Alpha [Filter]
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- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
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- Topic : Graphical Models [Filter]
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Registered: 2010-06-25 13:25 |
2. nloptr - an R interface to NLopt - nloptr provides an R interface to NLopt, a free/open-source library for nonlinear optimization providing a common interface to a number of different optimization routines which can handle nonlinear constraints and lower and upper bounds for the controls. |
- Development Status : 4 - Beta [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : Microsoft : Windows [Filter]
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- Topic : Optimization : General Purpose Continuous Solvers [Filter]
- Topic : Optimization : Mathematical Programming : Nonlinear Programming [Filter]
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Registered: 2010-10-30 18:59 |
3. Spatiotemporal Data S4 class/meths - Spatiotemporal data S4 objects, methods, support for data with spatial and temporal components |
- Development Status : 1 - Planning [Filter]
- Development Status : 2 - Pre-Alpha [Filter]
- Intended Audience : Developers [Filter]
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- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
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- Topic : Spatial Data & Statistics : Classes for Spatial Data [Filter]
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Registered: 2009-09-26 15:38 |
4. distr - S4 classes for distributions - Project distr currently hosts pkg's distr, distrEx, distrSim, distrTEst, distrTeach, distrMod, distrDoc, startupmsg, SweaveListingUtils, distrEllipse, distrRnews, setRNG. For reference, see also vignette "distr" in pkg distrDoc. |
- Development Status : 5 - Production/Stable [Filter]
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- Natural Language : German [Filter]
- Operating System : OS Independent [Filter]
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- Programming Language : R [Filter]
- Topic : Education [Filter]
- Topic : Robust Statistics [Filter]
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Registered: 2007-11-06 19:55 |
5. CoreArray - The package provides a high-level R interface to CoreArray Genomic Data Structure (GDS) data files, which are portable across platforms and include hierarchical structure to store multiple scalable array-oriented data sets with metadata information. |
- Development Status : 5 - Production/Stable [Filter]
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- License : OSI Approved : GNU General Public License (GPL) [Filter]
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- Topic : Bioinformatics [Filter]
- Topic : Database [Filter]
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Registered: 2014-05-31 04:36 |
6. RMVL - Mappable vector library provides convenient way to access large datasets on solid state drives. This bypasses limitation of physical memory size as well as limited bandwidth of database interfaces. Memory mapped data can be shared between multiple R processes. Access speed depends on storage medium, so solid state drive is recommended, preferably with PCI Express (or M.2 nvme) interface. The data is memory mapped into R and then accessed using usual R list and array subscription operators. The layout of underlying MVL files is optimized for large datasets. The vectors are stored to guarantee alignment for vector intrinsics after memory map. The package is built on top of libMVL, which can be used as standalone C library. libMVL has simple C API making it easy to interchange of datasets with outside programs. |
- Development Status : 3 - Alpha [Filter]
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- Topic : Database [Filter]
- Topic : High Performance Computing : Large Memory [Filter]
- Topic : High Performance Computing : Parallel Computing [Filter]
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Registered: 2021-08-19 02:16 |
7. lpSolveAPI - An R interface for lp_solve, a Mixed Integer Linear Programming (MILP) solver with support for pure linear, (mixed) integer/binary, semi-continuous and special ordered sets (SOS) models. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
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- Topic : Other/Nonlisted Topic [Filter]
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Registered: 2008-02-08 10:47 |
8. Rlsf - This package provides functions for using R with the LSF cluster/grid queuing system. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
- Intended Audience : Developers [Filter]
- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
- Operating System : POSIX : Linux [Filter]
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- Programming Language : Unix Shell [Filter]
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Registered: 2008-06-25 19:02 |
9. A R/C++ Template Library - A template library for R/C++ developers. |
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Registered: 2008-07-28 22:29 |
10. h5R An interface to hdf5 files from R - This project aims to provide a simple read/write interface to HDF 5 files. |
- Development Status : 4 - Beta [Filter]
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- Operating System : MacOS [Filter]
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Registered: 2010-04-09 23:53 |
11. bigmemory - The bigmemory package allows a user to create, store, access, and manipulate massive matrices. Matrices may be allocated in shared memory or memory-mapped files. |
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- Topic : High Performance Computing : Large Memory [Filter]
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Registered: 2009-09-30 17:27 |
12. SMfSB - R code associated with the second and third editions of the book Stochastic Modelling for Systems Biology, by Darren J Wilkinson, published by Chapman & Hall/CRC Press. |
- Development Status : 5 - Production/Stable [Filter]
- Environment : Console (Text Based) [Filter]
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- Programming Language : R [Filter]
- Topic : Bayesian Statistics : Specific Model Fitting [Filter]
- Topic : Bioinformatics : Statistics [Filter]
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Registered: 2011-02-18 14:08 |
13. RHugin - R interface and API for the HUGIN Decision Engine. |
- Development Status : 5 - Production/Stable [Filter]
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- Topic : Graphical Models [Filter]
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Registered: 2008-07-08 10:13 |
14. CITAN - CITAN is a library of functions useful in - but not limited to - quantitative research in the field of scientometrics. |
- Development Status : 4 - Beta [Filter]
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- Topic : Database [Filter]
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- Topic : Text : Text Mining [Filter]
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Registered: 2011-04-24 10:39 |
15. RFLPtools - RFLPtools provides functions to analyse DNA fragment samples (i.e. derived from RFLP-analysis) and standalone BLAST report files (i.e. DNA sequence analysis). |
- Development Status : 4 - Beta [Filter]
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- Natural Language : German [Filter]
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Registered: 2010-02-24 09:24 |
16. Boost C++ Template Library Project - Boost provides free peer-reviewed portable C++ source libraries implemented mostly as templates. We place a subset of them in this package as a more efficient distribution system for CRAN. |
- Development Status : 2 - Pre-Alpha [Filter]
- Development Status : 3 - Alpha [Filter]
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- Intended Audience : System Administrators [Filter]
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Registered: 2012-09-02 22:26 |
17. rErlang - R/Erlang Interface - This project provides a library which is a bi-directional interface allowing calling R functions from Erlang code and accessing Erlang functions from R sessions. |
- Development Status : 1 - Planning [Filter]
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- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
- Natural Language : English [Filter]
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- Natural Language : Japanese [Filter]
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Registered: 2009-08-05 10:50 |
18. Rcplex - Interface to the CPLEX optimization engine. Supports Linux and Windows. |
- Development Status : 4 - Beta [Filter]
- Environment : Console (Text Based) [Filter]
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- License : OSI Approved : GNU Lesser General Public License (LGPL) (Now Filtering)
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- Operating System : Microsoft : Windows [Filter]
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- Programming Language : C/C\+\+ (Now Filtering)
- Programming Language : R [Filter]
- Topic : Optimization : Mathematical Programming : Integer Programming [Filter]
- Topic : Optimization : Mathematical Programming : Linear Programming [Filter]
- Topic : Optimization : Mathematical Programming : Quadratic Programming [Filter]
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Registered: 2008-08-04 05:27 |